arXiv AI

A Voxel-Spacing-Aware Extension of PyRadiomics for Anisotropic Texture Analysis

arXiv AI
Sep 15

Physically Aware Radiomics Without Interpolation: Disentangling Voxel Geometry and Signal Modification in CT and MRI

The study introduces a voxel-spacing-aware radiomic framework that incorporates physical geometry into texture computation without resampling, modifying PyRadiomics to preserve native image signals. Four extraction configurations—native non-resampled (NR), isotropic resampling (RS), voxel-spacing-aware (VS), and fake-isotropic preprocessing (FK)—were compared across 685 CT pulmonary nodules and 209 MRI breast cases, evaluating 196 radiomic descriptors. Results show that VS closely matches NR (median ICC(A,1) ≈0.998) while RS and FK exhibit lower agreement, indicating that spacing metadata alone can significantly influence radiomic features.

By David Corral Fontecha, Juan Miranda Bautista, Pablo Menendez Fern\'andez-Miranda, Sergio Rubio-Mart\'in, Lara Lloret Iglesias, Jose A. Vega
arXiv Computer Vision
Sep 3

RAFT-DVC: Resolution-Aware Machine Learning-Based Digital Volume Correlation

RAFT-DVC is a resolution‑aware family of recurrent all‑pairs field transform (RAFT) based digital volume correlation (DVC) solvers that use encoder downsampling factors of 2, 4, and 8. The solvers localize displacement to about 0.017 feature‑grid voxels, with raw‑volume error scaling roughly as 0.017 s voxels, and exhibit complementary operating regimes determined by displacement reach and volumetric‑texture compatibility. Synthetic benchmarks show comparable performance to tuned classical DVC for fine‑texture, small‑to‑moderate displacements, while outperforming it for coarse‑texture, large‑displacement scenarios; additional tests on confocal and micro‑CT images confirm the importance of matching solver regimes to deformation magnitude and texture, and demonstrate cross‑texture transfer and improved accuracy after correcting sampler geometry.

By Zixiang Tong, Lehu Bu, Jin Yang
arXiv Machine Learning
Jul 31

Negative controls reveal volume-driven confounding in radiomics and imaging foundation model features

arXiv:2607. 28423v1 Announce Type: cross Abstract: Radiomics and imaging foundation models promise non-invasive biomarkers of tumour biology, yet predictive signatures may reflect tumour volume or acquisition artifacts rather than meaningful image structure.

By Katy L. Scott, Sejin Kim, Joshua Siraj, Caryn Geady, Matthew Boccalon, Mattea Welch, Mogtaba Alim, Andrew J. Hope, Benjamin Haibe-Kains
arXiv AI
Jun 3

Sparse-View Lung Nodule Volumetry from Digitally Reconstructed Radiographs via AReT: Anatomy-Regularized TensoRF

arXiv:2606. 02639v1 Announce Type: cross Abstract: We identify and resolve a previously unreported failure mode in TensoRF when applied to X-ray attenuation fields: the default density shift of -10, originally introduced for RGB scene reconstruction, suppresses density gradients and prevents sparse-view medical reconstruction regardless of learning rate or regularization strategy.

By Spoorthi M, Suja Palaniswamy
arXiv AI
Jun 10

Deep Slice Interpolation for Reducing Through-Plane Anisotropy and Noise in Head CT

arXiv:2606. 09953v1 Announce Type: cross Abstract: Head computed tomography (CT) typically uses sub-millimeter in-plane resolution but 2-5 mm through-plane spacing, creating substantial anisotropy that degrades multiplanar reconstructions, volumetric measurements such as hematoma volume estimation, and downstream algorithms that assume near-isotropic voxels.

By Luis Cort\'es Ferre, Miguel A. Guti\'errez-Naranjo, Marcin Balcerzyk
arXiv Computer Vision
Aug 27

Rendering Novel Views of MRI Using 3D Gaussian Splatting

The paper proposes using 3D Gaussian Splatting to reconstruct volumetric MRI data from non‑aligned scans, enabling the generation of novel view planes that are better aligned with spinal anatomy. These resampled images are then used to predict ordinal severity grades of localized stenosis, outperforming traditional Voxel Interpolation and Cubic B‑spline resampling methods. Across all stenosis conditions, the Gaussian Splatting approach yields more accurate diagnostic gradings than raw or conventionally resampled scans.

By Robin Y. Park, Mark C. Eid, Rhydian Windsor, Amir Jamaludin, Ana I. L. Namburete, Jo\~ao F. Henriques, Andrew Zisserman
arXiv Computer Vision
Aug 21

FermatSyn: SAM2-Enhanced Bidirectional Mamba with Isotropic Spiral Scanning for Multi-Modal Medical Image Synthesis

arXiv:2505. 07687v4 Announce Type: replace-cross Abstract: Multi-modal medical image synthesis is pivotal for alleviating clinical data scarcity, yet existing methods fail to reconcile global anatomical consistency with high-fidelity local detail.

By Feng Yuan, Yifan Gao, Haoyue Li, Xin Gao