arXiv Computer Vision

Rendering Novel Views of MRI Using 3D Gaussian Splatting

The paper proposes using 3D Gaussian Splatting to reconstruct volumetric MRI data from non‑aligned scans, enabling the generation of novel view planes that are better aligned with spinal anatomy. These resampled images are then used to predict ordinal severity grades of localized stenosis, outperforming traditional Voxel Interpolation and Cubic B‑spline resampling methods. Across all stenosis conditions, the Gaussian Splatting approach yields more accurate diagnostic gradings than raw or conventionally resampled scans.

arXiv AI
Jun 10

Deep Slice Interpolation for Reducing Through-Plane Anisotropy and Noise in Head CT

arXiv:2606. 09953v1 Announce Type: cross Abstract: Head computed tomography (CT) typically uses sub-millimeter in-plane resolution but 2-5 mm through-plane spacing, creating substantial anisotropy that degrades multiplanar reconstructions, volumetric measurements such as hematoma volume estimation, and downstream algorithms that assume near-isotropic voxels.

By Luis Cort\'es Ferre, Miguel A. Guti\'errez-Naranjo, Marcin Balcerzyk
arXiv Computer Vision
Sep 25

Anatomy-Aligned Surface Field Learning for Myocardial Reconstruction from Sparse Short-Axis Cine MRI

The paper presents an anatomy‑aligned surface learning framework for reconstructing patient‑specific 4D myocardial surfaces from sparsely sampled short‑axis cine MRI. By parameterizing epicardial and endocardial surfaces on a shared circumferential‑longitudinal UV domain, the method transforms irregular 3D reconstruction into structured coordinate‑field completion, enabling explicit correspondence across subjects and cardiac phases. Experiments on three public datasets show the approach outperforms mesh‑based and implicit methods, achieving Chamfer distances around 2.6–2.9 mm and preserving ventricular function with small errors in volume and ejection fraction.

By Xiaohan Yuan, Xuan Yang, Qingya Li, Yangang Wang, Lei Li
arXiv Computer Vision
Sep 23

Uncertainty-Aware 3D Residual Wavelet Diffusion for Ultra Low-Field MRI Super-Resolution

The paper introduces a 3D residual wavelet diffusion model for super‑resolving ultra low‑field MRI scans. By using a lossless wavelet reparameterisation, residual shifting, and domain randomisation, the method fits whole‑brain data on a single GPU, speeds up sampling, and generalises across scanners. It achieves volumetric accuracy comparable to leading regression approaches while producing per‑voxel uncertainty maps that reveal under‑determined regions and preserves disease‑relevant atrophy in cognitively impaired subjects.

By Rui W. Yeow, Millie Beament, Fred Dick, Raha Razin, Martina Bocchetta, David L. Thomas, Henry F. J. Tregidgo, Daniel C. Alexander, James H. Cole
arXiv AI
Sep 15

Physically Aware Radiomics Without Interpolation: Disentangling Voxel Geometry and Signal Modification in CT and MRI

The study introduces a voxel-spacing-aware radiomic framework that incorporates physical geometry into texture computation without resampling, modifying PyRadiomics to preserve native image signals. Four extraction configurations—native non-resampled (NR), isotropic resampling (RS), voxel-spacing-aware (VS), and fake-isotropic preprocessing (FK)—were compared across 685 CT pulmonary nodules and 209 MRI breast cases, evaluating 196 radiomic descriptors. Results show that VS closely matches NR (median ICC(A,1) ≈0.998) while RS and FK exhibit lower agreement, indicating that spacing metadata alone can significantly influence radiomic features.

By David Corral Fontecha, Juan Miranda Bautista, Pablo Menendez Fern\'andez-Miranda, Sergio Rubio-Mart\'in, Lara Lloret Iglesias, Jose A. Vega
arXiv Computer Vision
Sep 22

MIGA:Shared-Geometry Gaussian Representation with Implicit Amplitude Modeling for Accelerated 3D Multi-Echo MRI

MIGA is a scan‑specific framework for accelerated 3D multi‑echo MRI that uses shared anisotropic Gaussian geometry, a coordinate‑conditioned multi‑output amplitude network, and explicit echo‑specific phase variables. The method jointly optimizes all components from undersampled multi‑coil k‑space data without requiring fully sampled training data. Experiments demonstrate that MIGA outperforms existing methods across various imaging tasks and acceleration factors, especially under stronger undersampling, and offers a favorable quality‑cost balance among full‑volume multi‑echo reconstruction techniques.

By Jingran Xu, Yuanyuan Liu, Yanjie Zhu
Hugging Face Trending Papers
Jul 20

SAMRI-3D: Adapting SAM2 for 3D MRI Segmentation with Global Volume Tokens

Foundation models such as Segment Anything Model 2 (SAM2) have transformed natural-image and video segmentation, and recent work has begun adapting them to medical imaging. These adaptations, however, are largely general-purpose models that treat MRI as one modality among many; large-scale, MRI-specific modelling and benchmarking remain limited, even though MRI's low soft-tissue contrast leaves many boundaries effectively invisible on individual slices.

arXiv Computer Vision
Sep 25

When Misalignment Becomes Supervision: Structured Label Noise in Supervised Synthetic CT Generation

The paper examines how residual misalignments from registration procedures introduce structured label noise in supervised synthetic CT (sCT) generation. It shows that voxel‑wise metrics are heavily influenced by the consistency between training and evaluation registrations, and that training with anatomically consistent registrations reduces variability and improves robustness. Introducing a perceptual loss based on a pretrained Segment Anything encoder yields sharper, more anatomically coherent sCT and highlights the need for anatomy‑oriented evaluation.

By Valentin Boussot, Cedric Hemon, Caroline Lafond, Jean-Claude Nunes, Jean-Louis Dillenseger
arXiv AI
Jun 24

Render-FM: Feedforward Model for Real-time Photorealistic Volumetric Rendering

arXiv:2505. 17338v3 Announce Type: replace-cross Abstract: Photorealistic volumetric rendering of CT scans greatly benefits clinical workflows, yet neural approaches such as Neural Radiance Fields (NeRF) and 3D Gaussian Splatting (3DGS) require prohibitive per-scan optimization (hours for NeRF, about 30 minutes for 3DGS), making them impractical in clinical settings.

By Zhongpai Gao, Benjamin Planche, Meng Zheng, Anwesa Choudhuri, Van Nguyen Nguyen, Terrence Chen, Ziyan Wu