arXiv:2608. 12695v1 Announce Type: new Abstract: Self-supervised electrocardiogram (ECG) models are often trained on a few seconds of ECG signal and, increasingly, on discretized token sequences.
By Ahmed Sameh, Ramzi Al-Sharawi, Yogatheesan Varatharajah
arXiv:2606. 15284v1 Announce Type: cross Abstract: Photoplethysmography (PPG) plays a central role in wearable health monitoring and clinical decision support.
By Chenyang He, Xinyi Shao, Shun Huang, Bosong Huang, Daoqiang Zhang, Ming Jing, Cheng Ding
arXiv:2607. 22264v1 Announce Type: new Abstract: Autoregressive foundation models trained on tokenized electronic health records (EHRs) can support zero-shot clinical prediction, yet most operate on structured event codes alone, and do not incorporate multiple modalities in a principled way.
By Yuxuan Liu, Joshua Placidi, Jinpei Han, Alfred John Balston, Marek Rei, A. Aldo Faisal
arXiv:2609.36794v1 Announce Type: new
Abstract: Signal features derived from photoplethysmography (PPG) require different signal durations to characterize. Existing PPG foundation models treat durati...
By Suyeong Lee, Hochang Lee, Seokyong Sheem, Daekyum Kim
PPG-Bench is an open‑source benchmark that evaluates five publicly available photoplethysmography (PPG) foundation models across nine datasets and 26 tasks, covering cardiovascular state estimation, activity, sleep, screening, and identification. The benchmark tests models under four downstream regimes—linear probing, random forests, frozen MLP probes, and end‑to‑end finetuning—while also comparing them to three controls: a random/constant baseline, a deterministic pulse‑rate‑variability feature set, and a generic time‑series foundation model (MOMENT). Results show that over a third of task‑regime combinations yield no advantage for any PPG foundation model over the baseline, and in most cases no PPG‑specific model outperforms the simple controls, indicating that current PPG foundation models lack generalised, transferable representations.
By Arvasu Kulkarni, Mahir Jain, Aditya Ray Mishra, Sandeep Singh, Siddharth Panwar
PPG-to-vital-sign reconstruction turns a wrist-worn photoplethysmogram into clinical waveforms such as the ECG. Long-horizon multivariate time-series forecasting underpins planning in energy, weather,...
arXiv:2608. 00943v1 Announce Type: cross Abstract: Automated sleep staging assigns discrete stage labels to successive time epochs throughout an overnight recording; conventionally each window spans at least 30 seconds, reflecting the minimum temporal resolution of the clinical scoring standard.
By Shuntian Zheng, Jiawei Wang, Cong Fu, Huan Yu, Chen Chen, Yu Guan, Sai Gu
The paper introduces ROOSTER, a shared relative‑alignment module that learns how to map a condition sequence to a target sequence for both PPG‑to‑vital‑sign reconstruction and long‑horizon multivariate time‑series forecasting. ROOSTER uses a learnable periodic‑comb bias over the target‑condition offset, allowing it to discover identity alignment or seasonal lags and report the chosen correspondence. Experiments show that ROOSTER outperforms existing baselines on heart‑rate and respiratory‑rate reconstruction from wrist‑worn photoplethysmograms, and achieves the lowest horizon‑averaged MSE on four forecasting benchmarks, outperforming the underlying forecasting model in most dataset‑horizon settings.
By Ragamayi Puli, Shunya Nagashima
arXiv:2605. 10840v3 Announce Type: replace-cross Abstract: We present Clin-JEPA, a multi-phase co-training framework for joint-embedding predictive (JEPA) pretraining on EHR patient trajectories.
By Yixuan Yang, Mehak Arora, Ryan Zhang, Baraa Abed, Junseob Kim, Tilendra Choudhary, Md Hassanuzzaman, Kevin Zhu, Ayman Ali, Chengkun Yang, Alasdair Edward Gent, Victor Moas, Rishikesan Kamaleswaran
Neural State Prediction (NSP) is a latent‑predictive framework designed to curb shortcut learning in EEG foundation models. By using a target encoder updated with an exponential moving average, identity residualization, and topology‑separated context, NSP constrains both the prediction target and the available context. Trained on 2.2 million EEG segments, NSP outperforms baselines on 14 datasets in the EEG‑FM‑Bench, achieving 63.94 % macro balanced accuracy.
By Kieren Yu, Ziyang Liu, Chang Huang, Jintai Chen, Kaishun Wu
arXiv:2607. 23554v1 Announce Type: cross Abstract: In this paper, we propose the MAEConformer, a novel self-supervised learning framework that combines the Conformer architecture with the Masked Autoencoder (MAE) paradigm for large-scale representation learning from unlabelled electroencephalography (EEG) and heart rate variability (HRV) signals.
By Shuwen Yu, William P Marnane, Geraldine B. Boylan, Gordon Lightbody
The paper presents a hybrid CNN–state‑space–attention backbone designed for 12‑lead ECG classification, combining early waveform tokenization, mixed temporal dynamics modeling, and late global attention. It introduces an ECG‑oriented Joint‑Embedding Predictive Pretraining (JEPA) that samples span masks at latent resolution and predicts clean latent targets via a momentum encoder, avoiding waveform reconstruction. Experiments on CPSC2018, Chapman‑Shaoxing, and PTB‑XL, with pretraining on ~350K unlabeled CODE‑15 recordings, demonstrate strong supervised baselines and improved transfer, especially in low‑label scenarios and with LoRA adaptation.
By Yakoub Bazi, Sarah Aljuhani, Mohamad M. Al Rahhal, Mansour Zuair, Naif Alajlan