arXiv AI

From Reconstruction to Interpretation: Zero-Setup Multi-Phase Segmentation of X-ray Tomography Data

arXiv:2607. 12175v1 Announce Type: cross Abstract: X-ray tomography enables nondestructive characterization of material microstructures, while advances in micro-CT imaging have accelerated volumetric data acquisition and reconstruction.

arXiv Computer Vision
Sep 23

FleXray: Universal Clinical X-ray Segmentation

arXiv:2609.26756v1 Announce Type: new Abstract: X-ray is medicine's most widely used imaging modality, yet remains among its least quantitative. Unlike volumetric modalities like CT or MRI, X-ray col...

By Victor Ion Butoi, Vivek Gopalakrishnan, John V. Guttag, Adrian V. Dalca, Neel Dey
Hugging Face Trending Papers
Aug 13

Splat-based Metal Artifact Reduction in Cone-Beam CT via Polychromatic Modeling

Cone-beam computed tomography (CBCT) enables volumetric reconstruction from X-ray projections, but suffers from severe artifacts--especially beam hardening--when imaging materials with high attenuation such as metals. These artifacts arise from the polychromatic nature of X-rays and are not properly addressed by conventional monochromatic reconstruction algorithms.

arXiv Machine Learning
Jul 17

XCT-SAM: Sequential Parameter-Efficient Domain Adaptation of SAM for Industrial XCT Defect Segmentation

arXiv:2607. 14287v1 Announce Type: cross Abstract: Defect segmentation in additive manufacturing (AM) X-ray computed tomography (XCT) images remains challenging due to severe class imbalance and large distribution shifts across scan conditions.

By Md Mahedi Hasan, Md Mushfiqur Rahaman, Alan Pachkovskiy, Imtiaz Ahmed, Jeremy Dawson, Srinjoy Das
arXiv Computer Vision
Aug 28

Differentiable Jitter Correction using Deep Learning-based Image Quality Metric for Phase-Contrast Micro-CT

This paper introduces a fully differentiable jitter correction technique for X‑ray phase‑contrast micro‑CT that uses a deep learning‑based image quality metric to estimate and compensate per‑projection rigid jitter directly from the acquired data, eliminating the need for a motion‑free reference scan. The method adapts a gradient‑based auto‑focus strategy to parallel‑beam geometry, benchmarks several objective functions, and validates the sensitivity of the visual information fidelity (VIF) metric to jitter artifacts. A compact 3D CNN predicts VIF scores from corrupted volumes, while a spatially selective total variation penalty suppresses spurious high‑frequency structures during optimization; experiments on biological specimens from multiple synchrotron beamlines confirm that the pipeline reliably restores fine structural detail across morphologically distinct samples.

By Junan Chen, Yiting Jia, Joscha Maier, Dominik John, Sami Wirtensohn, Imke Greving, Silja Flenner, Matthias Wieczorek, Julia Herzen
arXiv AI
Aug 19

Learning Where and What to Lift for Bi-planar X-ray-to-CT Reconstruction

The paper introduces LiftXR, a geometry‑guided framework that first reconstructs a 3D anatomical layout from bi‑planar X‑ray images and then uses this layout to guide CT volume reconstruction. An anatomical parser refines the layout by analyzing the reconstructed CT, enabling region‑specific intensity calibration. Experiments on two public datasets show LiftXR surpasses recent X‑ray‑to‑CT methods and improves downstream segmentation performance.

By Yifei Wu, Yicheng Wu, Qiang Ma, Qi Chen, Renyang Gu, Xinyu Liu, Yongsheng Pan, Yong Xia
arXiv Computer Vision
Sep 4

$K$-NeAS: Scalable Multi-Material CT Reconstruction Using Neural SDFs

The paper introduces $K$-NeAS, a scalable neural architecture for multi-material CT reconstruction that replaces separate material networks with a shared latent backbone and a differentiable $K$-material soft selector. It automates attenuation bounds using a Gaussian Mixture Model and adds a scheduled auxiliary floater loss to reduce geometric hallucinations in sparse-view settings. Evaluated on four clinical CBCT datasets, $K$-NeAS achieves higher 3D volumetric fidelity—up to a 1.88 dB PSNR gain over a single-material baseline—and shows improved robustness under extreme sparsity, outperforming baselines by up to 1.17 dB.

By Daksh K. Shah, Emmanouil Nikolakakis, Razvan Marinescu
arXiv Computer Vision
Sep 24

nnFoundation: 3D Foundation Models for Radiology

nnFoundation introduces complementary convolutional and transformer-based 3D foundation models for radiology, trained on 2.1 million CT, MRI, and PET volumes from 125 datasets. The models are evaluated on 108 tasks—including segmentation, detection, classification, report generation, and image retrieval—under domain shift, low-data, and low-compute scenarios, consistently outperforming prior 3D foundation models and training from scratch. Performance varies by task type, with convolutional models excelling at spatially localized tasks and transformer models at global semantic reasoning, and dynamic alignment with dataset characteristics further enhances transferability.

By Constantin Ulrich Harsy, Tassilo Wald, Karol Gotkowski, Yannick Kirchhoff, Marcel Knopp, Maximilian Rokuss, Elisa Stegmeier, Philipp Schader, Dasha Trofimova, Raphael Stock, Kim-Celine Kahl, Stephen Schaumann, Selen Erkan, David Zimmerer, Stefan Denner, Moritz Langenberg, Sebastian Ziegler, Katharina Eckstein, Maximilian Fischer, Jonathan Suprijadi, B\'alint Kov\'acs, Benjamin Hamm, Anand Deshpande, Dimitrios Bounias, Nico Disch, Shuhan Xiao, Jessica K\"achele, Jan Sellner, Rajesh Baidya, Jeremias Traub, Lars Kr\"amer, Maximilian Zenk, Tim R\"adsch, Stefan Dvoretskii, Robin Peretzke, Jonathan Deissler, Alexandra Ertl, Partha Ghosh, Kris Dreher, Stefan Dinkelacker, Annika Reinke, Evangelia Christodoulou, Numan Saeed, Yoland Savriama, Santiago Estrada, David K\"ugler, Laura Alexandra Daza Barragan, Cristina Isabel Gonzalez Osorio, Jan Peeken, Michael Baumgartner, Marvin Teichmann, Guillaume Chabin, Matthias Kirchler, Valentin Koch, for the ALFA study, Markus Hohenhaus, Dimitri Koslov, Nina Decker, Mohammad Yaqub, Arnd Heuser, Martin Reuter, Julia A. Schnabel, Tobias Heimann, Florin Ghesu, Paul Brachmann, Claus P. Heu{\ss}el, Alexander Radbruch, Gianluca Brugnara, Aditya Rastogi, Martha Foltyn-Dumitru, Heinz-Peter Schlemmer, Ignaz Reicht, Julius C. Holzschuh, Michael Bach, Bram Stieltjes, Kai Schlamp, Lena Maier-Hein, Marco Nolden, Ralf Floca, Paul F. J\"ager, Philipp Vollmuth, Fabian Isensee, Klaus H. Maier-Hein