Hugging Face Trending Papers

CORAL: A Benchmark for Structure-aware and Brain-wide Neuron Reconstruction in Light Microscopy

arXiv Computer Vision
Sep 10

Advanced Brain Tissue Imaging with Data-Consistent Diffusion Priors in Laminographic X-Ray Nanoimaging

arXiv:2609.10456v1 Announce Type: new Abstract: Nanoscale imaging of mammalian brains is critical for connectomics. X-ray laminography enables high-throughput imaging of extended, plate-like biologic...

By Wenxuan Fang, Abraham L. Levitan, Ana Diaz, Carles Bosch, Adrian Wanner, Andreas T. Schaefer, Mirko Holler, Tomas Aidukas, Nicholas W. Phillips, Yuxin Zhang, Alexandra Pacureanu, Manuel Guizar-Sicairos, Luis Barba
Hugging Face Trending Papers
Jun 3

Coarse-to-fine Hierarchical Architecture with Sequential Mamba for Brain Reconstruction

Understanding the relationship between deep visual representations and the human visual system is a fundamental challenge in computational neuroscience. While modern vision models achieve strong performance in image recognition, their correspondence with the hierarchical organization of the human visual cortex remains an open question.

arXiv AI
Aug 26

CytoNet: A Foundation Model for the Human Cerebral Cortex at Cellular Resolution

CytoNet is a foundation model trained on 1 million unlabeled microscopic image patches from over 4,000 histological sections of nine postmortem brains, and evaluated on 2,000 sections from five additional brains. By using co‑localization in the cortical sheet for self‑supervision, it learns expressive, anatomically meaningful feature representations that enable downstream tasks such as area classification, laminar segmentation, microarchitectural quantification, and exploratory mapping of cortical subdivisions. Functional parcellation analyses demonstrate links between cytoarchitecture and macroscale functional organization, establishing CytoNet as a unified framework for scalable analysis of cortical microarchitecture and its relationship to structure‑function organization in the human cerebral cortex.

By Christian Schiffer, Zeynep Boztoprak, Jan-Oliver Kropp, Julia Th\"onni{\ss}en, Katia Berr, Hannah Spitzer, Mathis Bode, Thomas Lippert, Katrin Amunts, Timo Dickscheid