arXiv:2609.00396v1 Announce Type: new
Abstract: Histopathological whole slide images (WSIs) are central to cancer diagnosis, but their gigapixel scale, tissue heterogeneity, weak slide-level supervis...
By Chad Wong, Sicheng Chen, Tianyi Zhang, Enhui Chai, Yueming Jin, Zeyu Liu, Fei Xia
MoSSGate is a plug‑and‑play module for U‑Net that improves skin lesion segmentation by combining boundary‑aware spatial gating, an external memory modulator, and parallel 2D state‑space modeling for efficient global context aggregation. The design limits long‑range propagation to informative regions, adapts dynamically to each sample, and preserves sharp lesion boundaries while keeping computational cost low. Experiments on ISIC 2017 and 2018 show state‑of‑the‑art accuracy (86.3%/85.9% mIoU, 92.6%/90.6% Dice) with fewer FLOPs than most CNN baselines.
By Anum Awan, Mahnoor Buriro, Muhammad Younas Khan, Md Imam Ahasan
arXiv:2609.24116v1 Announce Type: new
Abstract: Although deep learning has advanced Whole Slide Image (WSI) Analysis, tissue artifacts like bubbles and folds often cause silent failures by concealing...
By Hyeseong Lee, Eunsu Kim, D M Bappy, Ho Heon Kim, Youngsuk Lee, Se Young Chun, Jang-Hwan Choi, Sung Hak Lee, Sangjeong Ahn
arXiv:2609.36429v1 Announce Type: new
Abstract: Predicting gene expression from H&E-stained histology images offers a scalable alternative to costly spatial transcriptomics, yet most existing methods...
By Zijun Gao, Chunbin Gu, Jinxi Xiang, Xiangde Luo, Pheng-Ann Heng
arXiv:2605.05164v2 Announce Type: replace-cross
Abstract: Accurate analysis of histopathological images is critical for disease diagnosis and treatment planning. Whole-slide images (WSIs), which digi...
By Enhui Chai, Sicheng Chen, Tianyi Zhang, Chad Wong, Kecheng Huang, Zeyu Liu, Fei Xia
SWITi is a test-time method for reducing artifacts in tiled predictions, particularly for neural networks that learn posterior distributions from which solutions are sampled at inference time. Tiled predictions are unavoidable for large image data, and artifacts arise whenever tiles are smaller than a network's receptive field and when tiles are independent posterior samples.
arXiv:2607. 18990v1 Announce Type: cross Abstract: SWITi is a test-time method for reducing artifacts in tiled predictions, particularly for neural networks that learn posterior distributions from which solutions are sampled at inference time.
By Federico Carrara, Aman Kukde, Melisande Croft, Joran Deschamps, Florian Jug
arXiv:2511. 01143v2 Announce Type: replace-cross Abstract: Early and accurate segmentation of colorectal polyps is critical for reducing colorectal cancer mortality, which has been extensively explored by academia and industry.
By Ziyi Wang, Yuanmei Zhang, Baoying Ye, Yimei Jiang, Leilei Gu, Suncheng Xiang
arXiv:2606. 06864v1 Announce Type: cross Abstract: Multiple instance learning (MIL) has become a standard paradigm for whole slide image (WSI) analysis in digital pathology, as it enables slide-level prediction without dense annotations.
By Yonghan Shin, Won-Ki Jeong
arXiv:2608. 15537v1 Announce Type: cross Abstract: Accurate boundary delineation remains a persistent challenge in dermoscopic image segmentation because of blurred lesion margins, heterogeneous textures, and complex background artifacts.
By Wang Jiangtao, Nur Intan Raihana Ruhaiyem, Fu Panpan, Yang Yu, Huang Yan
SpineContextResUNet is a lightweight 3D Residual U‑Net that uses a Context Block with parallel multi‑dilated convolutions to efficiently capture long‑range anatomical dependencies for spine CT segmentation. It achieves Dice scores of 88.17% on VerSe2020 and 88.13% on CTSpine1K while maintaining a small ~1.7 M parameter footprint. Compared to resource‑heavy Transformers and baselines that fail on commodity hardware, SpineContextResUNet delivers robust inference on edge devices such as the Nvidia Jetson Orin Nano.
By K S Nithurshen, Saurabh J. Shigwan
AtlasPatch is a scalable, high‑throughput whole‑slide image preprocessing method that uses a foundation‑model‑based tissue detector operating at thumbnail resolution. By updating only 0.076% of the SAM2 model weights and leveraging a curated dataset of 30,000 thumbnail‑mask pairs, it generates accurate tissue masks and directly produces patch coordinates at the desired magnification, eliminating repeated patch‑level inference. The approach achieves 0.986 precision, is up to 16× faster than existing deep‑learning methods, and maintains downstream multiple‑instance learning performance across six slide‑level classification tasks.
By Ahmed Alagha, Christopher Leclerc, Yousef Kotp, Omar Metwally, Calvin Moras, Peter Rentopoulos, Ghodsiyeh Rostami, Bich Ngoc Nguyen, Jumanah Baig, Abdelhakim Khellaf, Vincent Quoc-Huy Trinh, Rabeb Mizouni, Hadi Otrok, Jamal Bentahar, Mahdi S. Hosseini