arXiv Computer Vision

Seamless Whole Slide Label-Free Virtual Staining

The paper introduces the Consistency Memory Bank (COMB), a label‑free virtual staining framework designed to process gigapixel Whole Slide Images without the memory bottlenecks of patch‑based deep learning. COMB decouples context storage from computation, using a dynamic retrieval mechanism to fetch feature representations from adjacent tiles, local padding to resolve spatial discontinuities, and neighbor‑aware channel attention to stabilize statistical drift. The method achieves superior perceptual fidelity and tiling consistency compared to state‑of‑the‑art baselines, and its improved continuity suggests downstream benefits for tumor segmentation.

arXiv Computer Vision
1d ago

MoSSGate: Memory-Modulated State-Space Gating for Skin Lesion Segmentation

MoSSGate is a plug‑and‑play module for U‑Net that improves skin lesion segmentation by combining boundary‑aware spatial gating, an external memory modulator, and parallel 2D state‑space modeling for efficient global context aggregation. The design limits long‑range propagation to informative regions, adapts dynamically to each sample, and preserves sharp lesion boundaries while keeping computational cost low. Experiments on ISIC 2017 and 2018 show state‑of‑the‑art accuracy (86.3%/85.9% mIoU, 92.6%/90.6% Dice) with fewer FLOPs than most CNN baselines.

By Anum Awan, Mahnoor Buriro, Muhammad Younas Khan, Md Imam Ahasan
Hugging Face Trending Papers
Jul 21

SWITi: Quantifying and Reducing Tiling Artifacts with Sliding Window Inner Tiling

SWITi is a test-time method for reducing artifacts in tiled predictions, particularly for neural networks that learn posterior distributions from which solutions are sampled at inference time. Tiled predictions are unavoidable for large image data, and artifacts arise whenever tiles are smaller than a network's receptive field and when tiles are independent posterior samples.

arXiv Computer Vision
Sep 3

AtlasPatch: Scalable Foundation Model-based Tissue Detection and Patch Extraction for Computational Pathology

AtlasPatch is a scalable, high‑throughput whole‑slide image preprocessing method that uses a foundation‑model‑based tissue detector operating at thumbnail resolution. By updating only 0.076% of the SAM2 model weights and leveraging a curated dataset of 30,000 thumbnail‑mask pairs, it generates accurate tissue masks and directly produces patch coordinates at the desired magnification, eliminating repeated patch‑level inference. The approach achieves 0.986 precision, is up to 16× faster than existing deep‑learning methods, and maintains downstream multiple‑instance learning performance across six slide‑level classification tasks.

By Ahmed Alagha, Christopher Leclerc, Yousef Kotp, Omar Metwally, Calvin Moras, Peter Rentopoulos, Ghodsiyeh Rostami, Bich Ngoc Nguyen, Jumanah Baig, Abdelhakim Khellaf, Vincent Quoc-Huy Trinh, Rabeb Mizouni, Hadi Otrok, Jamal Bentahar, Mahdi S. Hosseini
Hugging Face Trending Papers
Jul 1

MedCAGD: Context-Aware Gated Decoder for Efficient Medical Image Segmentation

Medical image segmentation relies on the ability of encoder-decoder architectures to translate rich feature representations into accurate pixel-level predictions under challenging conditions such as low contrast, structural ambiguity, and scale variability. While recent advances in large-scale pretraining and transformer-based encoders have substantially improved feature extraction, segmentation accuracy remains constrained by decoder design, particularly in terms of cross-scale alignment, contextual integration, and boundary preservation.

arXiv AI
Sep 2

StainPresetNet: Stain Preset Network for Fast Multi-to-Multi Stain Normalization

StainPresetNet is a new framework for stain normalization that combines structural preservation with dataset-level color mapping while remaining computationally efficient. It uses pixel-wise normalization guided by preset reference images, allowing multi-directional adaptability without retraining. Experiments on cytopathology and histopathology datasets show that it outperforms conventional methods in color mapping accuracy, improves classifier generalization, and cuts computational overhead by 90% compared to existing deep learning approaches.

By Hongtao Kang, Die Luo, Li Chen, Jing Cai, Junbo Hu, Xiuli Liu, Shenghua Cheng
arXiv AI
Jul 21

GigaPath-Flash and GigaTIME-Flash: Efficient Pathology Foundation Models for Whole-Slide and Tumor Microenvironment Analysis

arXiv:2607. 18218v1 Announce Type: cross Abstract: Foundation models have emerged as a driving force in computational pathology, with the potential to transform cancer diagnosis, prognosis, and treatment selection by learning transferable representations from large-scale histopathology data.

By Naoto Usuyama, Jeya Maria Jose Valanarasu, Sicong Yao, Hanwen Xu, Jaspreet Bagga, Guanghui Qin, Robert E. Kramer, Cliff Wong, Soohee Lee, Hao Qiu, Theodore Zhengde Zhao, Racheli Ben Shimol, Angela Crabtree, Kevin Matlock, Eduardo Alejandro Lozano Garcia, Naiteek Sangani, Alberto Santamaria-Pang, Jason Entenmann, Alexandra Q. Bartlett, Bill J. Wright, Bernard A. Fox, Brian Piening, Sheng Zhang, Sheng Wang, Tristan Naumann, Carlo Bifulco, Hoifung Poon