arXiv:2607. 17671v1 Announce Type: new Abstract: Large-scale single-cell perturbation atlases make it possible to ask an inverse question: given an observed transcriptional response, which annotated targets and compounds in a fixed library are most consistent with that response?
By Kseniia Vaniushkina, Jeongmin Lim, Jinyong Park
arXiv:2607. 17409v1 Announce Type: cross Abstract: We study the problem of sequentially evaluating a new large language model (LLM) on a fixed question set using historical performance data from prior LLMs.
By Chia-Yu Hsu, Shubhanshu Shekhar
arXiv:2605. 04344v2 Announce Type: replace-cross Abstract: This paper develops a statistical theory of extrapolation for large language models, by reinterpreting them through pre-post-additive noise models.
By Zetai Cen, Jin Zhu, Xinwei Shen, Chengchun Shi
arXiv:2604. 16197v2 Announce Type: replace Abstract: Data attribution and valuation are critical for understanding data-model synergy for Large Language Models (LLMs), yet existing gradient-based methods suffer from scalability challenges on LLMs.
By Yide Ran, Jianwen Xie, Minghui Wang, Wenjin Zheng, Denghui Zhang, Chuan Li, Zhaozhuo Xu
arXiv:2602. 14161v2 Announce Type: replace Abstract: Detecting prompt injection, jailbreak attacks, and harmful requests is critical for deploying LLM-based agents safely, yet current evaluation practices in this literature overestimate generalization.
By Max Fomin
arXiv:2607. 16201v1 Announce Type: new Abstract: Ontology engineering remains a critical bottleneck in knowledge-intensive AI systems.
By Sergei Sergienko
arXiv:2607. 17411v1 Announce Type: cross Abstract: Inverse rendering is traditionally solved via differentiable renderers and gradient descent, which requires substantial problem-specific engineering and is prone to getting stuck in local minima due to ambiguities.
By Andrei-Timotei Ardelean, Michael Fischer, Tim Weyrich, Tom\'a\v{s} Iser
arXiv:2607. 17146v1 Announce Type: cross Abstract: We present a continuous geometric framework that models the discrete algebraic operations of the Transformer architecture as an integro-differential equation (IDE) on a semantic fiber bundle $\calE = \calM \times \R^d$.
By Zhihua Liang
arXiv:2607. 17082v1 Announce Type: new Abstract: Large language model agents solve tasks by generating trajectories that interleave planning, tool calls, and intermediate results.
By Babak Barazandeh, Subhabrata Majumdar, George Michailidis
arXiv:2607. 16233v1 Announce Type: cross Abstract: Integrating heterogeneous genomic and clinical modalities for joint cancer subtype classification and survival prediction remains a key challenge in precision oncology.
By Suxing Liu Byungwon Min
arXiv:2602. 02138v3 Announce Type: replace-cross Abstract: Despite the remarkable success that Multi-Agent Code Generation Systems (MACGS) have achieved, the inherent complexity of multi-agent architectures produces substantial volumes of intermediate outputs.
By Zongyi Lyu, Zhenlan Ji, Songqiang Chen, Liwen Wang, Yuheng Huang, Shuai Wang, Shing-Chi Cheung
arXiv:2607. 17948v1 Announce Type: new Abstract: Agent-based models (ABMs) rely on simple, explicit and reproducible rules for individual decision making, while complex collective behavior emerges from interactions among agents.
By Stefano Blando, Emanuele Guerrazzi, Riccardo Porcedda, Giuseppe Squillace, Max Tschaikowski, Andrea Vandin
arXiv:2607. 16882v1 Announce Type: new Abstract: Time series forecasting (TSF) is vital to many applications, yet existing models often struggle to capture the heterogeneous long-range global patterns and short-range local variations in multivariate time series.
By Wenqiang Ma, Chen Cheng, Xue Cheng, Jiarui Ye
arXiv:2607. 16721v1 Announce Type: new Abstract: The strongest open-weight coding models are mixture-of-experts (MoE) networks: most of their size comes from large pools of "expert" subnetworks, of which only a few act on any token.
By Anik Jha
arXiv:2607. 16248v1 Announce Type: cross Abstract: Long-context large language model inference relies on the KV cache to avoid redundant attention computation, but incurs high memory and bandwidth overheads.
By Gradwell Dzikanyanga, Yanqi Pan, Weihao Yang, Donglei Wu, Wen Xia, Hao Huang
arXiv:2605. 14473v4 Announce Type: replace-cross Abstract: Retrieval-Augmented Generation (RAG) is usually evaluated by whether the final answer is correct.
By Yihang Chen, Pin Qian, Su Wang, Sipeng Zhang, Huan Xu, Shuhuai Lin, Xinpeng Wei
arXiv:2605. 23393v2 Announce Type: replace-cross Abstract: Mechanistic interpretability of transformers requires identifying not just which components matter but how they compose into the computational route that produced a prediction.
By Po-Kai Chen, Aske Plaat, Niki van Stein
arXiv:2607. 16872v1 Announce Type: cross Abstract: Diffusion large language models (dLLMs) are a promising alternative to autoregressive generation.
By Haolin Ren, Ziyang Huang, Chenhao Yuan, Jun Zhao, Kang Liu
arXiv:2607. 16848v1 Announce Type: cross Abstract: Long-term memory is becoming a core component of LLM agents, but most memory benchmarks evaluate conversations or compact summaries, while research agents need to restore evidence from full scientific papers.
By Maksim Sheverev, David Finkelstein, Sergey Nikolenko
arXiv:2602. 21492v2 Announce Type: replace-cross Abstract: Reinforcement learning (RL) has become a central post-training paradigm for large language models (LLMs), but its performance is highly sensitive to the quality of training problems.
By Ningyuan Yang, Weihua Du, Weiwei Sun, Sean Welleck, Yiming Yang