arXiv AI

Diagnostic-Guided Longitudinal Modeling for Forecasting Retinal Atrophy Progression

The study proposes a diagnostic-guided approach to choose between stochastic and deterministic longitudinal imaging models based on whether inter-visit changes are driven by disease progression or acquisition variability. Applied to a large, heterogeneous Optos fundus autofluorescence archive, the diagnostic revealed weak time-dependent changes and limited benefit from stochastic models, leading to the development of the deterministic Temporal Retinal U‑Net (TRU). TRU outperformed other classical and deep‑learning comparators on image‑level and eye‑specific progression metrics across held‑out and independent zero‑shot transfer cohorts, though with slightly lower precision in a smaller cross‑vendor cohort.

arXiv Machine Learning
Oct 19

CF-NODE: Counterfactual Spatial Node Intervention for Test-Time Adaptation Under Domain Shift, Evaluated Across Five Diabetic Retinopathy Datasets

CF‑NODE is a counterfactual test‑time adaptation framework designed for diabetic retinopathy grading across different cameras, clinics, and patient populations. It ranks internal spatial nodes by attention, feature magnitude, and similarity, then progressively attenuates the highest‑ranked nodes and calibrates predictions based on the stability of the expected grade response. Evaluated on five external datasets, CF‑NODE outperforms four existing methods, achieving higher AUC and macro‑F1 scores and providing more balanced recognition across severity levels.

By Sabarish G, Deepak Parashar
arXiv Machine Learning
Jul 14

Imputation-free transformer learning enables robust Alzheimer's disease prediction and calibrated uncertainty quantification across heterogeneous clinical cohorts

arXiv:2607. 11656v1 Announce Type: cross Abstract: Accurate diagnostic classification and disease-severity prediction for Alzheimer's disease are hampered by the incompleteness and heterogeneity of real-world clinical data.

By Christelle Schneuwly Diaz, Narmina Baghirova, Duy-Thanh Vu, Duy-Cat Can, Gilles Allali, Philippe Ryvlin, Oliver Y. Ch\'en
arXiv Computer Vision
Sep 15

Reverse Spatio-Temporal Disease Progression Modelling

The paper introduces a reverse spatio‑temporal disease progression model that reconstructs unobserved healthier anatomy from later diseased scans. It employs a two‑stage architecture: a frozen 3D vector‑quantised autoencoder creates a discrete latent space, and a Neural ODE learns continuous‑time dynamics, with a recurrent encoder initializing the latent state from reverse‑ordered observations. Experiments on a synthetic Morpho‑MNIST benchmark and longitudinal Alzheimer’s MRIs show the model can recover unseen prior states and outperform baseline methods in predicting healthy trajectories.

By Ulugbek Shernazarov, Moucheng Xu, Inomjon Ramatov
arXiv Machine Learning
Oct 7

Stochastic Siamese MAE Pretraining for Longitudinal Medical Images

arXiv:2512.23441v2 Announce Type: replace Abstract: Temporally aware image representations are crucial for capturing disease progression in 3D volumes of longitudinal medical datasets. However, recen...

By Taha Emre, Arunava Chakravarty, Thomas Pinetz, Dmitrii Lachinov, Martin J. Menten, Hendrik Scholl, Sobha Sivaprasad, Daniel Rueckert, Andrew Lotery, Stefan Sacu, Ursula Schmidt-Erfurth, Hrvoje Bogunovi\'c
arXiv AI
Jun 16

EyeMVP: OCT-Informed Fundus Representation Learning via Paired CFP--OCT Pretraining

arXiv:2606. 15129v1 Announce Type: cross Abstract: Color fundus photography (CFP) is the mainstay for large-scale retinal screening, yet its diagnostic capacity is constrained by the lack of depth-resolved structural information.

By Zhuo Deng, Ruiheng Zhang, Ziheng Zhang, Weihao Gao, Yitong Li, Qian Wang, Lei Shao, Jiaoyue Dong, Zhixi Zeng, Lijian Fang, Haibo Wang, Xiaobin Lin, Tao Liu, Zhicheng Du, Zhengwei Zhang, Lin Yang, Zheng Gong, Xinyu Zhao, Zhenquan Wu, Fang Li, Zhiguang Zhou, Guoming Zhang, Sun Jing, Han Lv, Wenbin We, Lan Ma
arXiv Computer Vision
Oct 22

From Canon to Nikon: Camera Domain Shift and Potential Equity Implications in Retinal AI

The study examines how the choice of camera—Canon versus Nikon—affects image quality and AI performance in retinal screening for diabetic retinopathy. In a Brazilian cohort of 8,524 patients, Nikon images were more than twice as likely to be of inadequate quality compared with Canon, despite being cheaper. Using a frozen pretrained retinal foundation model, the authors evaluated 12 disease classification tasks across different resolutions and classifiers, finding that camera-related performance differences vary widely and are not consistently mitigated by higher resolution or classifier choice.

By Lisa Y. W. Tang
arXiv AI
Oct 27

FOCUS: Benchmarking Retinal Model Generalization from Foundation Vision Encoders to Multimodal LLMs

The paper introduces FOCUS, a cross‑dataset benchmark for retinal fundus models that evaluates vision‑only encoders, vision‑language dual encoders, and multimodal large language models across ten public datasets. It measures ranking performance, calibration, subgroup disparities, and image‑quality robustness for tasks such as diabetic retinopathy and glaucomatous optic neuropathy. Results show no single model family dominates, with vision‑only encoders ranking highest on average, while fine‑tuning improves in‑domain performance but varies in external transfer.

By David Restrepo, Chenwei Wu, Luis Filipe Nakayama, Miguel L. Martins, Stergios Christodoulidis, Maria Vakalopoulou, Enzo Ferrante
Hugging Face Trending Papers
Jul 27

Color Fundus Photography Analysis: Co-evolution of Data, Preprocessing, and Modeling toward Multimodal AI

Color Fundus Photography (CFP) is a primary non-invasive imaging modality for large-scale screening of ophthalmic and systemic diseases. Existing surveys mainly summarize task-specific algorithms, datasets, or preprocessing techniques independently, lacking a unified perspective on their co-evolution with modern artificial intelligence.