arXiv:2606. 08375v1 Announce Type: new Abstract: All-atom generative modeling of 3D biomolecular complexes has emerged as the dominant paradigm for predicting the structure of proteins and protein-ligand systems.
By Gianluca Scarpellini, Ron Shprints, Peter Holderrieth, Juno Nam, Pranav Murugan, Rafael G\'omez-Bombarelli, Tommi Jaakola, Maruan Al-Shedivat, Nicholas Matthew Boffi, Avishek Joey Bose
arXiv:2606. 08291v1 Announce Type: new Abstract: We study the symmetric multi-type orthogonal non-negative matrix tri-factorization problem, where several symmetric non-negative matrices are simultaneously approximated by factors of the form $GS_{i}G^{\top}$, with a shared non-negative and orthogonal factor $G$.
By Rok Hribar, Gregor Papa, Janez Povh, Andrej Kastrin
arXiv:2606. 08221v1 Announce Type: new Abstract: Designing OLED molecules with targeted optical properties remains challenging due to the scarcity of high-quality data and the limited reliability of conditional control in generative models across chemical motifs.
By Haozhe Huang, Manuel Gonzalez Lastre, Hyun Suk Park, Jorge A. Campos-Gonzalez-Angulo, Xinjian Liu, Al\'an Aspuru-Guzik
arXiv:2606. 08372v1 Announce Type: cross Abstract: Synthetic data is increasingly promoted as a privacy-preserving substitute for releasing sensitive tabular records, yet its central adversarial threat ("reconstruction", the recovery of an individual's hidden attribute values from a synthetic release and a handful of known quasi-identifiers) has been studied only in scattered, hard-to-compare settings.
By Steven Golob, Sikha Pentyala, Martine De Cock
arXiv:2605. 02439v3 Announce Type: replace-cross Abstract: Synthesizing realistic and diverse anomalous samples from limited data is vital for robust model generalization.
By Fuyun Wang, Yuanzhi Wang, Xu Guo, Sujia Huang, Tong Zhang, Dan Wang, Hui Yan, Xin Liu, Zhen Cui
arXiv:2606. 09169v1 Announce Type: new Abstract: In recent years, unified multimodal models (UMMs) have emerged to support both understanding and generation within a single framework.
By Lingyi Meng, Zecong Tang, Haoran Li, Tengju Ru, Zhejun Cui, Weitong Lian, Qi Kang, Hangshuo Cao, Yichen Zhu, Yechi Liu, Kaixuan Wang, Yu-Jie Yuan, Chunwei Wang, Yu Zhang, Bo Dai
arXiv:2606. 08493v1 Announce Type: cross Abstract: \textit{Tissue graph counterfactuals} ask how a cell's expression would change under altered spatial neighbor contexts.
By Abdul Moeed, Stefan Schrod, Martin Rohbeck, Marc Jan Bonder, Pavlo Lutsik, Oliver Stegle, Daniel Dimitrov
arXiv:2606. 07601v1 Announce Type: cross Abstract: We introduce the Laplace-Fourier Neural Operator (LFNO), a unified framework for modeling dynamical systems across transient and steady-state regimes by integrating the spectral advantages of Laplace and Fourier Neural Operators.
By Jeongun Ha, Sanga Yoon, Donghun Lee
arXiv:2606. 07526v1 Announce Type: cross Abstract: Large Language Models (LLMs) have shown strong potential for recommendation (LLMRec) due to their powerful reasoning and generalization abilities.
By Lin Mu, Guoji Wang, Li Ni, Lei Sang, Zhize Wu, Peiquan Jin, Yiwen Zhang
arXiv:2606. 08976v1 Announce Type: new Abstract: LLM-based RTL generation and reasoning is a promising direction for hardware design automation.
By Jing Wang, Shang Liu, Wenji Fang, Yuchao Wu, Yugao Zhu, Zhiyao Xie
arXiv:2512. 20845v2 Announce Type: replace Abstract: LLMs have shown the capacity to improve their performance on reasoning tasks through reflecting on their mistakes, and acting with these reflections in mind.
By Onat Ozer, Yuchen Wang, Grace Wu, Daniel Dosti, Honghao Zhang, Vivi De La Rue
arXiv:2606. 09245v1 Announce Type: cross Abstract: Few-shot object detection has gained widely attention in recent years.
By Yuan Zeng, Bin Song, Jie Guo, Yuwen Chen
arXiv:2606. 07929v1 Announce Type: new Abstract: Large language models (LLMs) are entering clinical practice based on benchmark accuracy that may fail to detect safety-relevant failure modes.
By Yuan Shen, Xiaojun Wu, Linghua Yu
arXiv:2511. 11041v2 Announce Type: replace-cross Abstract: We find that current sentence-embedding models produce outputs with a consistent bias: every embedding $e$ decomposes as $\tilde e + \mu$, where the mean $\mu$ is near-identical across all sentences.
By Xingyu Ren, Youran Sun, Haoyu Liang
arXiv:2606. 08432v1 Announce Type: new Abstract: On-policy distillation (OPD) has become a central post-training tool for large language models (LLMs), providing dense per-token teacher supervision along the student's own rollouts.
By Li Jiang, Haoran Xu, Yichuan Ding, Amy Zhang
arXiv:2606. 08122v1 Announce Type: new Abstract: Predicting a user's next Point-of-Interest (POI) based on their historical check-in records is a fundamental task in location-based services.
By Qingxiang Liu, Anqi Liang, Zhuoyang Jiang, Yutian Jiang, Sisuo Lyu, Yu Ji, Haomin Wen, Yuxuan Liang
arXiv:2601. 21816v2 Announce Type: replace Abstract: Evaluating the performance of large language models (LLMs) from human preference data is crucial for obtaining LLM leaderboards.
By Dennis Frauen, Athiya Deviyani, Mihaela van der Schaar, Stefan Feuerriegel
arXiv:2606. 07643v1 Announce Type: cross Abstract: Recent advances in Omni-Multimodal Large Language Models (Omni-MLLMs) have enabled strong integration of vision, audio, and language.
By Yaoting Wang, Ziyi Zhang, Wenming Tu, Shaoxuan Xu, Wenjie Du, Cheng Liang, Weijun Wang, Yuanchao Li, Guangyao Li, Hao Fei, Yuanchun Li, Henghui Ding, Yunxin Liu
arXiv:2606. 08030v1 Announce Type: cross Abstract: Agentic tutoring systems introduce a coordination challenge: multiple agents may propose different but reasonable interventions, yet only one response can be delivered to the learner.
By Eric S. Qiu, Joyce Gill
arXiv:2606. 07567v1 Announce Type: cross Abstract: Protein function is largely determined by molecular surface geometry and physicochemical complementarity, yet most protein design methods condition only on backbone structure.
By Fang Wu, Shuting Jin, Xiangru Tang, Mark Gerstein, Xiangxiang Zeng, Yejin Choi, Jure Leskovec, Jinbo Xu