arXiv Computer Vision

AA-ViT: Anatomically Aware Vision Transformer with Structural and Frequency Guidance for Contrast Enhanced Brain MRI Synthesis

The paper introduces AA‑ViT, an anatomically aware vision transformer that synthesizes contrast‑enhanced brain MRI from pre‑contrast modalities (T1, T2, FLAIR) by incorporating structural and frequency guidance. Experiments on the BraTS 2021 dataset show that AA‑ViT preserves anatomical and lesion boundaries, achieving higher PSNR and SSIM than existing methods. A clinical evaluation by four experts on 19 glioma cases yielded a mean score of 3.94/5, indicating promising clinical relevance.

arXiv Computer Vision
Oct 16

Mixture of Multi-Sequence Feature Difference for Contrast-Enhanced MRI Synthesis

The paper presents a method for synthesizing contrast‑enhanced MRI (CE‑MRI) from non‑contrast sequences using a novel Mixture of Feature Difference (MoFD) module. MoFD dynamically weights and aggregates features from individual sequences and their explicit differences, improving image fidelity and perceptual quality over baseline approaches. Experiments on UCSF‑PDGM and UPenn‑GBM datasets show that the synthesized images reconstruct tumor regions well and yield segmentation performance comparable to real CE‑MRI, with regression‑based training achieving higher structural fidelity.

By Jonghun Kim, Junmo Kwon, Hyunjin Park
arXiv Computer Vision
Oct 21

CAPS: Clinically-Verifiable Anatomy-Prioritized Synthesis for Missing MRI Imputation in Brain Tumor Segmentation

CAPS is a Clinically‑Verifiable Anatomy‑Prioritized Synthesis framework designed to impute missing MRI modalities for brain tumor segmentation. It uses a hybrid loss (L₁ + L_AFP + L_DualDice) to preserve deep anatomical features and topological boundaries, achieving high synthesis fidelity and robust segmentation (82.38% mean Dice) on the BraTS Adult Glioma dataset. The method also generalizes well to unseen cohorts and has been validated by blinded radiologists, who report improved image quality and clinical utility.

By Cecilia Diana-Albelda, Arthur Longuefosse, Mario Rub\'en Paz Campos, \'Alvaro Garc\'ia-Mart\'in, Jesus Bescos
arXiv AI
Aug 3

Dense Temporal Contrast Synthesis via Conditioned Latent Transport

arXiv:2607. 29394v1 Announce Type: cross Abstract: Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) is essential for breast cancer management, but reliance on gadolinium-based contrast agents (GBCAs) restricts use in contraindicated populations, prolongs scan protocols, and presents environmental toxicity concerns.

By Smriti Joshi, Apostolia Tsirikoglou, Daniel M. Lang, Richard Osuala, Noah M\'arquez Varaa, Alejandro Guzman, Grzegorz Skorupko, Sebastian Ibarra Arregui, Lidia Garrucho, Akane Ohashi, Dimitra Ntoula, Eugen Divjak, O\u{g}uz Lafc{\i}, Jan C. Peeken, Julia A. Schnabel, Fredrik Strand, Oliver Diaz, Karim Lekadir
arXiv Computer Vision
Aug 21

FermatSyn: SAM2-Enhanced Bidirectional Mamba with Isotropic Spiral Scanning for Multi-Modal Medical Image Synthesis

arXiv:2505. 07687v4 Announce Type: replace-cross Abstract: Multi-modal medical image synthesis is pivotal for alleviating clinical data scarcity, yet existing methods fail to reconcile global anatomical consistency with high-fidelity local detail.

By Feng Yuan, Yifan Gao, Haoyue Li, Xin Gao
arXiv Computer Vision
Oct 22

DGCM-SSFA: Dual-Granularity Cross-Modulation and Sparse Strip Frequency Attention for Efficient 3T-to-7T MRI Synthesis

DGCM-SSFA is a compact multi‑domain attention framework that synthesizes high‑fidelity 7T MRI from routine 3T scans using only 11 million parameters. It combines a Dual‑Granularity Cross‑Modulated Feature Modulator (DGCM) and a Sparse Strip Frequency Attention (SSFA) module within a U‑Net Transformer backbone to enhance local edge details and capture global spatial context efficiently. Experiments on UNC and BNU 3T‑to‑7T datasets show competitive structural fidelity, achieving SSIM scores of 0.8431 (BNU T2w) and 0.8100 (BNU T1w) while remaining far smaller than Transformer‑based alternatives.

By Zhichun Fan, Zhiqiang Chen, Lanling Liu, Lingjun Liu, Zhonghua Xie
arXiv AI
Sep 18

Bridging Modalities on the Cortex: Surface-based MRI to PET Translation with a Diffusion Bridge

The paper introduces DB‑SUiT, a surface‑based diffusion bridge that translates cortical MRI to PET images directly on the cortical manifold. It employs a conditional spherical U‑shaped vision Transformer to capture multi‑scale surface features and long‑range dependencies while incorporating demographic and subcortical information. Evaluations on two dementia datasets show that the synthesized PET surfaces outperform MRI and PET volumes in automated classification and achieve high diagnostic accuracy in a blinded reader study.

By Yitong Li, Alexandra Samoylova, Fabian Bongratz, Timo Grimmer, Dennis M. Hedderich, Igor Yakushev, Christian Wachinger
arXiv Machine Learning
Jun 16

Lesion-DDPM: Lesion-Enhanced 3D Diffusion for MS MRI Synthesis

arXiv:2606. 15457v1 Announce Type: cross Abstract: 3D FLAIR MRI is widely recommended as one of the standard MRI sequences for brain imaging in multiple sclerosis (MS), but publicly available MS datasets remain relatively small and vary across scanners, acquisition protocols, and lesion patterns.

By Weidong Zhang, Yongchan Jung, Shafayat Mowla Anik, Furen Xiao, Vasudevan Janarthanan, Enkhzaya Chuluunbaatar, Byeong Kil Lee, Jeeho Ryoo