Optical coherence tomography (OCT) is a non-invasive imaging modality used for visualization of retinal tissue. However, OCT volumes are affected by speckle noise, which degrades image contrast and ob...
arXiv:2607. 16065v1 Announce Type: cross Abstract: Retinal layer segmentation in Optical Coherence Tomography (OCT) is a fundamental step for extracting quantitative biomarkers of retinal structure.
By Iker Moran-Cavero, Monica Hernandez, Elvira Mayordomo, Naiara Artiaga, Beatriz Pardi\~nas, Beatriz Cordon, Elena Garcia-Martin
arXiv:2608.17623v2 Announce Type: replace
Abstract: Retinal diseases are a leading cause of irreversible vision impairment, making early and accurate diagnosis essential for effective treatment. Opti...
By Cheng Cheng, Jin Hong
arXiv:2610.33143v1 Announce Type: new
Abstract: Deep learning approaches for retinal optical coherence tomography (OCT) predominantly rely on predefined disease categories, limiting their ability to...
By Tania Haghighi, Sina Gholami, Behafarin Emam, Jennifer I Lim, Theodore Leng, Atalie C Thompson, Hamed Tabkhi, Minhaj Nur Alam
arXiv:2607. 29337v1 Announce Type: cross Abstract: Background and Objective: Generating realistic medical images with anatomically accurate segmentation masks helps address the shortage of annotated data in medical imaging, particularly in optical coherence tomography (OCT) of mouse eyes, where manual retinal layer delineation is labour-intensive due to tiny structures and required expertise, resulting in scarce datasets.
By Fernando Garc\'ia-Torres, Roc\'io del Amor, Sandra Morales, \'Alvaro Barroso, Peter Heiduschka, Bj\"orn Kemper, Valery Naranjo
arXiv:2607. 03959v1 Announce Type: cross Abstract: Diabetic retinopathy (DR) is a leading cause of vision impairment worldwide, highlighting the need for accurate and accessible screening tools.
By Rashadul Hasan Badhon, Atalie Carina Thompson, Jennifer I. Lim, Theodore Leng, Minhaj Nur Alam
arXiv:2606. 16234v1 Announce Type: cross Abstract: Fundus fluorescein angiography (FFA) is critical for assessing retinal vascular abnormalities, but its acquisition is invasive and not always feasible.
By Tengfei Ma, Ruiqi Wu, Chenran Zhang, Ye Geng, Na Su, Xiangyuan Duanmu, Tao Zhou, Yi Zhou, Wen Fan
arXiv:2606. 05375v1 Announce Type: cross Abstract: Optical coherence tomographic angiography (OCTA) is a powerful technique for imaging retinal microvasculature.
By Yukun Guo, Min Gao, Tristan T. Hormel, Steven T. Bailey, Thomas S. Hwang, Yali Jia
CAMEL (Cross-Architecture Masked Embedding Learning) is a new distillation framework that transfers knowledge from large foundation models to lightweight student models using an asymmetric masking strategy during embedding learning. The method is designed for retinal image analysis, where existing foundation models like RETFound excel but are computationally heavy. Experiments on four datasets demonstrate that CAMEL maintains accuracy while dramatically reducing computational complexity, making it suitable for resource‑limited clinical settings.
By Andre Guarnier De Mitri, Giovani Decico Lucafo, Miller Matheus Lima Anacleto Rocha, Diego Furtado Silva
arXiv:2606. 09953v1 Announce Type: cross Abstract: Head computed tomography (CT) typically uses sub-millimeter in-plane resolution but 2-5 mm through-plane spacing, creating substantial anisotropy that degrades multiplanar reconstructions, volumetric measurements such as hematoma volume estimation, and downstream algorithms that assume near-isotropic voxels.
By Luis Cort\'es Ferre, Miguel A. Guti\'errez-Naranjo, Marcin Balcerzyk
The paper introduces a biology-informed heterogeneous graph representation that models retinal vessel segments, intercapillary areas, and the foveal avascular zone to predict diabetic retinopathy stages from OCTA images. This graph-based approach reframes staging as a graph-level classification task solved with a graph neural network, achieving AUC-ROC values up to 84% and outperforming biomarker-based classifiers, CNNs, and vision transformers. The method also provides detailed, interpretable explanations by precisely localizing abnormal vessels and non-perfusion areas.
By Laurin Lux, Alexander H. Berger, Maria Romeo Tricas, Richard Rosen, Alaa E. Fayed, Sobha Sivaprasada, Linus Kreitner, Jonas Weidner, Martin J. Menten, Daniel Rueckert, Johannes C. Paetzold
The paper presents a 3D foundation model for light sheet fluorescence microscopy (LSM) that is pretrained on a large curated set of 3D images from various organisms, stains, and imaging protocols. By jointly optimizing for masked reconstruction and image‑text alignment, the model learns transferable volumetric representations that dramatically reduce the need for annotated data. The pretrained backbone enables efficient few‑shot adaptation to downstream tasks such as segmentation, classification, and deblurring, consistently outperforming baselines according to standard metrics and expert evaluation.
By Adina Scheinfeld, Haotan Zhang, Shang Mu, Rudolf L. M. van Herten, Lucas Stoffl, Ali Erturk, Zhuhao Wu, Johannes C. Paetzold