arXiv:2607. 20136v1 Announce Type: cross Abstract: Slice-to-volume reconstruction (SVR) is the standard method for obtaining high-resolution (HR) 3D fetal brain volumes from motion-corrupted 2D MRI slice stacks acquired in multiple orientations.
By Busra Bulut, Maik Dannecker, Thomas Sanchez, Sara Neves Silva, Steven Jia, Jean-Baptiste Ledoux, Leo Pomar, Joanna Sichitiu, Yvan Gomez, Meriam Koob, Vincent Dunet, Maria Deprez, Guillaume Auzias, Francois Rousseau, Jana Hutter, Daniel Rueckert, Meritxell Bach Cuadra
FiberGeoText (FGT) is a vision‑language model that clusters short‑range superficial white matter streamlines from ultra‑high‑resolution diffusion MRI into population‑level groups. It jointly encodes each streamline’s 3‑D trajectory, cortical anatomical context (via text from multiple parcellation schemes), and shape, using a pretrained large language model to unify heterogeneous anatomical descriptions. Evaluations on 0.76 mm diffusion data show that FGT outperforms state‑of‑the‑art methods in cortical parcel coherence, shape consistency, cluster‑size consistency, and cross‑subject correspondence, and it generalizes well to unseen subjects, recovering 96.7 % of learned clusters.
By Yuqian Chen, R. Jarrett Rushmore, Guikun Chen, Fan Zhang, Edward Yeterian, Nikos Makris, Yogesh Rathi, Lauren J. O'Donnell
arXiv:2606. 15457v1 Announce Type: cross Abstract: 3D FLAIR MRI is widely recommended as one of the standard MRI sequences for brain imaging in multiple sclerosis (MS), but publicly available MS datasets remain relatively small and vary across scanners, acquisition protocols, and lesion patterns.
By Weidong Zhang, Yongchan Jung, Shafayat Mowla Anik, Furen Xiao, Vasudevan Janarthanan, Enkhzaya Chuluunbaatar, Byeong Kil Lee, Jeeho Ryoo
arXiv:2609.00960v1 Announce Type: new
Abstract: Magnetic resonance images of the same subject look markedly different across field strengths, which complicates the comparison and pooling of data acro...
By Baris Imre, Aram Salehi, Levente Baljer, Andrew Webb, Marius Staring, Efe Ilicak
Segmenting ischemic stroke lesions on T1-weighted (T1w) MRI acquired across different scanners and protocols without intensity standardization is difficult because lesions are subtle and share intensi...
The paper presents an anatomy‑aligned surface learning framework for reconstructing patient‑specific 4D myocardial surfaces from sparsely sampled short‑axis cine MRI. By parameterizing epicardial and endocardial surfaces on a shared circumferential‑longitudinal UV domain, the method transforms irregular 3D reconstruction into structured coordinate‑field completion, enabling explicit correspondence across subjects and cardiac phases. Experiments on three public datasets show the approach outperforms mesh‑based and implicit methods, achieving Chamfer distances around 2.6–2.9 mm and preserving ventricular function with small errors in volume and ejection fraction.
By Xiaohan Yuan, Xuan Yang, Qingya Li, Yangang Wang, Lei Li
arXiv:2604. 27277v3 Announce Type: replace-cross Abstract: Brain MRI underpins a wide range of neuroscientific and clinical applications, yet most learning-based methods remain task-specific and require substantial labeled data.
By Yizhou Wu, Shansong Wang, Yuheng Li, Mojtaba Safari, Mingzhe Hu, Chih-Wei Chang, Harini Veeraraghavan, Xiaofeng Yang
arXiv:2508.11450v2 Announce Type: replace-cross
Abstract: Subcortical segmentation in neuroimages plays an important role in understanding brain anatomy and facilitating computer-aided diagnosis of t...
By Augustine X. W. Lee, Pak-Hei Yeung, Jagath C. Rajapakse
arXiv:2608.23882v1 Announce Type: cross
Abstract: Segmenting ischemic stroke lesions on T1-weighted (T1w) MRI acquired across different scanners and protocols without intensity standardization is dif...
By Dexter Wen Jie Teo, Kumaradevan Punithakumar
arXiv:2609.06807v1 Announce Type: cross
Abstract: In this work, we comprehensively evaluate three popular feature-extraction paradigms in AI-based neuroimaging modeling: (1) computation of anatomical...
By Boyang Yu, Miquel Lopez Escoriza, Long Chen, Arjun V. Masurkar, Narges Razavian, Carlos Fernandez-Granda
arXiv:2610.08983v1 Announce Type: new
Abstract: Generative inpainting of brain MRI volumes is essential for synthesizing healthy tissue in pathological regions, improving the accuracy and reliability...
By Arnela Hadzic, Franz Thaler, Simon Johannes Joham, Martin Urschler
Patient-specific 4D myocardial reconstruction from cine MRI supports quantitative functional assessment, regional motion analysis, and simulation-based modeling. However, routinely acquired short-axis...