arXiv Machine Learning

Multi-task learning for the automatic grading of enlarged perivascular space burden using MRI

arXiv Computer Vision
Aug 27

Deep Learning Segmentation of Diffusion-Weighted MRI Acute Ischaemic Stroke: A Pragmatic Evaluation Across Three Datasets

The study evaluated a pragmatic deep‑learning approach for segmenting acute ischemic stroke lesions on diffusion‑weighted MRI. Using a self‑configured nnU‑Net trained on 1,744 cases and tested on 436, the baseline model achieved a median Dice similarity coefficient of 0.84, outperforming the DeepISLES ensemble, especially for smaller infarcts. The approach required minimal preprocessing and fast inference, suggesting it could streamline clinical stroke imaging workflows.

By Atle Bj{\o}rnerud, Till Schellhorn, Thor H. Skatt{\o}r, Terje Nome, Jon Andr\'e Ottesen, Anne Hege Aamodt, Bradley J MacIntosh
arXiv AI
Sep 1

Federated Learning for MRI-based BrainAGE: a multicenter study on post-stroke functional outcome prediction

arXiv:2506.15626v3 Announce Type: replace-cross Abstract: $\textbf{Objective:}$ Brain-predicted age difference (BrainAGE) is a neuroimaging biomarker reflecting brain health. However, training robust...

By Vincent Roca, Marc Tommasi, Paul Andrey, Aur\'elien Bellet, Markus D. Schirmer, Hilde Henon, Laurent Puy, Julien Ramon, Gr\'egory Kuchcinski, Martin Bretzner, Renaud Lopes
arXiv Computer Vision
Sep 3

Asymmetric Paired-Annotation Learning for Multi-Structure ULF Pediatric Brain MRI Segmentation

The paper introduces AURA, an nnU-Net-based asymmetric supervision strategy for segmenting ultra‑low‑field (0.064 T) pediatric brain MRI. It treats high‑field‑derived (HF) and low‑field‑edited (LF) annotations as distinct observations, anchoring training to the HF mask while gating LF contributions through a reliability mechanism. On a 16‑case development split, AURA achieved Dice scores comparable to HF‑only training and improved boundary metrics, demonstrating its potential for ULF MRI segmentation.

By Ha-Hieu Pham, Dang P. M. Cao, Minh Hoang Pham, Khanh Nguyen Vo Ngoc, Thanh-Huy Nguyen, Ulas Bagci, Huy-Hieu Pham
arXiv Computer Vision
Sep 14

A Multimodal Explainable Deep Learning Framework for Alzheimer's Disease Diagnosis using 3D Magnetic Resonance Imaging and Clinical Data

The study presents an explainable multimodal deep‑learning framework that combines a 3D CNN for T1‑weighted MRI with a feedforward network for harmonized clinical and demographic data to diagnose Alzheimer’s disease. Using 6,479 ADNI records and 1,703 OASIS‑3 records, the authors compare various model configurations on three‑way and pairwise diagnostic tasks, finding that performance and explanations vary by task, modality, fusion strategy, and cohort. SHAP and Integrated Gradients consistently highlight the MMSE score as the most influential tabular feature, while CAM‑based explanations differ across model setups and cohorts, indicating that explainability is not a stable property under cohort shift.

By Yusuf Brima, Marcellin Atemkeng, Lakshmana Rao Namamula, Antoine Vacavant
arXiv AI
6d ago

Combining General and Domain-Specific Pretext Tasks for Brain MR Image Segmentation

The paper investigates combining a domain‑specific self‑supervised task—voxel‑level brain age prediction—with a general task—image inpainting—to pretrain models for brain MRI segmentation. A multitask pretraining framework jointly optimizes both objectives, yielding representations that outperform single‑task pretraining and training from scratch on three segmentation benchmarks (multiple sclerosis lesions, ischemic stroke lesions, and cortical structures). The study demonstrates that integrating domain‑specific and general self‑supervised tasks benefits the development of generalizable neuroimaging foundation models.

By Tasneem Nasser, Susanne Schmid, Roberto Souza, Naser El-Sheimy
arXiv AI
Jun 9

Comparative evaluation of training strategies using partially labelled datasets for segmentation of white matter hyperintensities and stroke lesions in FLAIR MRI

arXiv:2601. 20503v2 Announce Type: replace-cross Abstract: White matter hyperintensities (WMH) and ischaemic stroke lesions (ISL) are key imaging biomarkers of cerebral small vessel disease (SVD) detectable on magnetic resonance imaging (MRI).

By Jesse Phitidis, Alison Q. Smithard, William N. Whiteley, Joanna M. Wardlaw, Miguel O. Bernabeu, Maria Vald\'es Hern\'andez
arXiv Computer Vision
Sep 18

Ischemic Stroke Segmentation and Net Water Uptake Quantification on Multicenter Non-Contrast CT Using Supervised Target-Domain Adaptation

This study presents a domain-aware deep learning framework based on nnU-Net for segmenting ischemic stroke lesions on non‑contrast CT scans and quantifying net water uptake (NWU). Trained on data from Hamburg and the Acute Ischemic Stroke Dataset, the model was fine‑tuned on small target‑domain subsets from Boston and ISLES, achieving median Dice scores of 0.68 and 0.56 for lesions ≥30 mL, and an NWU mean absolute error of 1.37 percentage points on the Boston cohort. The results demonstrate that target‑domain adaptation can enable accurate NCCT‑only infarct segmentation and low‑error NWU estimation across heterogeneous multicenter datasets.

By Linus Britt, Maximilian Nielsen, Susan Klapproth, Andre Kemmling, Michael H. Lev, Gabriel Broocks, Rene Werner, Thilo Sentker
arXiv Computer Vision
Sep 14

A Dual Cross-Attention Framework for Colposcopic CIN Grading and Swede Score Prediction Using a New Multi-Center Dataset

The paper introduces a dual cross‑attention deep learning framework for automated grading of Cervical Intraepithelial Neoplasia (CIN) and prediction of Swede scores, using a newly released BUET Multi‑Center Colposcopy Dataset. The architecture fuses paired multimodal cervigrams and employs a custom composite loss to handle class imbalance, achieving 71.85% accuracy and 86.23% AUC‑ROC for three‑class CIN grading, and AUC‑ROC values between 75.7% and 88.4% for individual Swede score components. The total predicted Swede Score has a mean absolute error of 1.489, indicating potential for AI‑assisted colposcopy screening in resource‑limited settings.

By Dania Khan, Nuzhat Aisha Shaikh, Asfina Hassan Juicy, Raiyun Kabir, S M Shahida, Taufiq Hasan