Retrieval-augmented generation

Retrieval pipelines, vector search, chunking and reranking: how models are grounded in a corpus instead of their weights.

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arXiv Machine Learning
Jul 9

Recovering Candidate Circadian Regulators of Arrhythmic Pituitary Hormone Genes Using Reliability-Weighted Magnetic Laplacian with rwMagLap

arXiv:2607. 06579v1 Announce Type: cross Abstract: We study how to recover candidate circadian-clock regulators of pituitary hormone genes that are important for women's health but do not show a clear 24-hour rhythm in bulk tissue, aiming to nominate clock-linked regulatory targets that could inform future chronopharmacologic and chronotherapeutic strategies.

By Shabnam Sodagari, Nick Jasperson
arXiv AI
Jul 9

Co-LMLM: Continuous-Query Limited Memory Language Models

arXiv:2607. 07707v1 Announce Type: cross Abstract: Limited memory language models (LMLMs) externalize factual knowledge during pretraining to a knowledge base (KB), rather than memorizing it in their weights.

By Yair Feldman, Linxi Zhao, Nathan Godey, Dongyoung Go, Yilun Hua, Kilian Q. Weinberger, Jennifer J. Sun, Yoav Artzi
arXiv AI
Jul 9

Heterogeneity-Adaptive Diffusion Schrodinger Bridge for PET-Guided Whole-Body MRI Translation

arXiv:2607. 07401v1 Announce Type: cross Abstract: While whole-body multimodal medical imaging scanners have been increasingly recognized for more effective medical applications, the excessive long acquisition time in PET-MR scanning is a major obstacle in more efficient clinical practice.

By Chengbo Wang, Jiacheng Yu, Linjie Bian, Ming Qi, Xiaosheng Liu, Tongtong Che, Jichang Zhang, Shuyu Li, Shaoli Song, Xiuying Wang
arXiv Machine Learning
Jul 9

STST-JEPA: Shallow-Target Spatio-Temporal Joint Embedding Prediction Architecture For EEG Self-Supervised Learning

arXiv:2607. 06629v1 Announce Type: new Abstract: Brain age -- the age inferred from a physiological recording -- is an emerging biomarker whose deviation from chronological age tracks neurological and psychiatric burden, and EEG is an attractive substrate for it because it is cheap, portable, and temporally rich.

By Roy Segal, Yoni Svechinsky, Tomer Fekete
arXiv AI
Jul 9

Health System Scale Semantic Search Across Unstructured Clinical Notes

arXiv:2604. 25605v2 Announce Type: replace-cross Abstract: Introduction: Semantic search, which retrieves documents based on conceptual similarity rather than keywords, offers advantages for retrieval of clinical information.

By Faith Wavinya Mutinda, Spandana Makeneni, Anna Lin, Shivaji Dutta, Irit R. Rasooly, Patrick Dibussolo, Shivani Kamath Belman, Hessam Shahriari, Kevin Murphy, Alex B. Ruan, Barbara H. Chaiyachati, Sanjay Chainani, Robert W. Grundmeier, Scott M. Haag, Jeffrey M. Miller, Heather M. Griffis, Ian M. Campbell
arXiv AI
Jul 9

When Prompts Ignore Structure: Graph-Based Attribute Reasoning for Calibrated VLMs

arXiv:2607. 07395v1 Announce Type: cross Abstract: Reliable confidence estimation remains a key limitation of test-time adaptation in vision-language models (VLMs), where prompt tuning improves zero-shot accuracy but often degrades calibration due to entropy-driven overconfidence.

By Tanay Sodha, Aditya Sharma, Ramya Hebbalaguppe, Vinti Agarwal, Pranav Murthy Yeluripaty