NeuroAtlas is the largest EEG benchmark to date, comprising 42 datasets and 260,000 hours of clinical EEG data across epilepsy, sleep medicine, brain age estimation, and brain‑computer interfaces. The study evaluates foundation models (FMs) for EEG against supervised baselines and generic time‑series FMs, finding that EEG‑specific FMs do not consistently outperform generic ones. It also demonstrates that standard machine‑learning metrics are inadequate for clinical relevance, advocating for task‑specific measures such as event‑level decision quality, hypnogram features, and brain‑age gap.
By Konstantinos Kontras, Trui Osselaer, Stylianos G. Mouslech, Angeliki-Ilektra Karaiskou, Guido Gagliardi, Thomas Strypsteen, Mohammad Hossein Badiei, Anku Rani, Maarten Vanmarcke, Miguel Bhagubai, Chanakya Ekbote, Jaedong Hwang, Christos Chatzichristos, Paul Pu Liang, Maarten De Vos
Neural State Prediction (NSP) is a latent‑predictive framework designed to curb shortcut learning in EEG foundation models. By using a target encoder updated with an exponential moving average, identity residualization, and topology‑separated context, NSP constrains both the prediction target and the available context. Trained on 2.2 million EEG segments, NSP outperforms baselines on 14 datasets in the EEG‑FM‑Bench, achieving 63.94 % macro balanced accuracy.
By Kieren Yu, Ziyang Liu, Chang Huang, Jintai Chen, Kaishun Wu
arXiv:2509. 17920v2 Announce Type: replace Abstract: Current deep learning models for electroencephalography (EEG) are often task-specific and depend on large labeled datasets, limiting their adaptability.
By Jamiyan Sukhbaatar, Satoshi Imamura, Ibuki Inoue, Shoya Murakami, Kazi Mahmudul Hassan, Seungwoo Han, Ingon Chanpornpakdi, Toshihisa Tanaka
arXiv:2508. 17742v3 Announce Type: replace-cross Abstract: Electroencephalography foundation models (EEG-FMs) have advanced brain signal analysis, but the lack of standardized evaluation benchmarks impedes model comparison and scientific progress.
By Wei Xiong, Jiangtong Li, Jie Li, Kun Zhu, Changjun Jiang
arXiv:2606. 00815v1 Announce Type: new Abstract: Electroencephalography (EEG) supports a variety of brain-computer interface (BCI) tasks ranging from brain-state monitoring to human-LLM interactions.
By Ziling Lu, Zongsheng Li, Xinke Shen, Kexin Lou, Yingyue Xin, Xiaoqi Chen, Shinan Wang, Xiang Chen, Jiahao Fan, Chenyu Huang, Xin Xu, Zhoujie Hou, Chen Wei, Quanying Liu
arXiv:2607. 23554v1 Announce Type: cross Abstract: In this paper, we propose the MAEConformer, a novel self-supervised learning framework that combines the Conformer architecture with the Masked Autoencoder (MAE) paradigm for large-scale representation learning from unlabelled electroencephalography (EEG) and heart rate variability (HRV) signals.
By Shuwen Yu, William P Marnane, Geraldine B. Boylan, Gordon Lightbody
arXiv:2603. 19100v2 Announce Type: replace Abstract: Electroencephalography (EEG) enables non-invasive monitoring of brain activity across clinical and neurotechnology applications, yet building foundation models for EEG remains challenging due to differing electrode topologies and computational scalability, as Transformer architectures incur quadratic sequence complexity.
By Dana\'e Broustail, Anna Tegon, Thorir Mar Ingolfsson, Yawei Li, Luca Benini
Brain4FMs is a unified benchmark for evaluating brain foundation models (BFMs) on both scalp EEG and intracranial EEG (iEEG). It incorporates 17 representative models and 21 public datasets spanning clinical diagnosis, sleep staging, communication, and affective computing, and offers dataset-aware preprocessing, cross‑subject evaluation, and standardized downstream workflows. The benchmark highlights that no single BFM consistently outperforms others across all tasks, modalities, and adaptation protocols, prompting further exploratory analyses of model‑specific spatial, spectral, and discrete representations.
By Fanqi Shen, Enhong Yang, Jiahe Li, Junru Hong, Xiaoran Pan, Zhizhang Yuan, Meng Li, Yang Yang
arXiv:2506.20354v3 Announce Type: replace-cross
Abstract: Learning from multi-variate time-series with heterogeneous channel configurations remains a fundamental challenge for deep neural networks, p...
By Francesco Carzaniga, Michael Hersche, Abu Sebastian, Kaspar Schindler, Abbas Rahimi
arXiv:2608.24597v1 Announce Type: cross
Abstract: Electroencephalography (EEG) is a widely used window into human brain function, but most EEG models remain tied to a one-dataset-one-model supervised...
By Yulong Dou, Han Wu, Guo Chen, Fangmao Ju, Zhiming Cui, Dinggang Shen
arXiv:2608.24727v1 Announce Type: cross
Abstract: EEG foundation models pretrained via self-supervised learning promise transferable representations, but their generalization remains limited, especia...
By Meghal Dani, Stefanie Liebe
arXiv:2607. 24519v1 Announce Type: cross Abstract: Pretrained EEG foundation models are increasingly proposed for clinical decoding, but their transfer across populations and robustness to negative controls remain unclear.
By Marzieh Zare