arXiv Machine Learning

MnemoDyn: Learning Resting State Dynamics from 40K FMRI sequences

arXiv AI
Jul 28

Real-time Reconstruction of Human Visual Perception from fMRI

arXiv:2607. 22753v1 Announce Type: cross Abstract: Real-time closed-loop neurofeedback based on functional magnetic resonance imaging (fMRI) has led to important scientific and clinical advances.

By Rishab S. Iyer, Jiaxin Cindy Tu, Cesar Kadir Torrico Villanueva, Anish Mahishi, Ross P. Kempner, Jacob S. Prince, Ernest W. Lo, Akash Bhowmick, Hritik Arasu, Amaar Chughtai, Elizabeth A. McDevitt, Paul S. Scotti, Kenneth A. Norman
arXiv Computer Vision
1d ago

Progression as Latent Drift: Generative Forecasting of Slow-Evolving Pathologies

The paper introduces Latent Drift, a generative forecasting framework that predicts slow-evolving neurodegenerative disease progression by learning changes in a compressed semantic representation rather than full-resolution anatomy. It addresses two failure modes—identity collapse and continuous interpolation trap—by removing pixel-level identity from the prediction target and applying Finite Scalar Quantization to suppress high-frequency nuisance fluctuations. Experiments on longitudinal 3D brain MRI demonstrate that Latent Drift outperforms diffusion and autoregressive transformer baselines in both generative fidelity and clinically relevant metrics.

By Yuxiang Feng, Juncheng Wang, Chao Xu, Wenlong Hou, Huihan Wang, Yijie Qian, Yang Liu, Baigui Sun, Yong Liu, Shujun Wang
arXiv Computer Vision
2d ago

Prior-Guided Implicit Neural Representations for Single-Subject Diffusion MRI Super-Resolution

The paper introduces a transfer‑learning framework that pre‑trains an implicit neural representation (INR) on a high‑resolution diffusion MRI template and then adapts it to individual subjects through registration and fine‑tuning. This approach enables native single‑subject super‑resolution, achieving a 4× through‑plane up‑sampling from 5 mm to 1.25 mm on Human Connectome Project data. Compared to a recent baseline, the method reduces NRMSE by 36–49 % and increases FSIM by 24–43 %, while training 6× faster and outperforming other INR‑based techniques on both image quality and domain‑specific metrics.

By Abdulkader Ghandoura, Marsil Zakour, William Consagra, Yogesh Rathi
arXiv AI
Jun 12

BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learning

arXiv:2604. 27277v3 Announce Type: replace-cross Abstract: Brain MRI underpins a wide range of neuroscientific and clinical applications, yet most learning-based methods remain task-specific and require substantial labeled data.

By Yizhou Wu, Shansong Wang, Yuheng Li, Mojtaba Safari, Mingzhe Hu, Chih-Wei Chang, Harini Veeraraghavan, Xiaofeng Yang
arXiv AI
Aug 24

Consistency Models for Fast MRI Reconstruction Using Regularization by Denoising

The paper introduces CM-RED, a fast MRI reconstruction method that combines a pretrained consistency model with the regularization by denoising framework. By integrating controlled noise injection into accelerated proximal gradient updates, CM-RED achieves high‑quality reconstructions on fastMRI knee and brain datasets with only four network function evaluations. It consistently outperforms existing diffusion‑ and consistency‑based approaches in quantitative metrics, visual fidelity, and robustness to hyperparameter changes.

By Merve G\"ulle, Junno Yun, Ya\c{s}ar Utku Al\c{c}alar, Mehmet Ak\c{c}akaya
arXiv Computer Vision
1d ago

Data-Efficient Networks for Multi-Contrast MRI Reconstruction based on a Generalized Content/Style Prior

arXiv:2609.01959v1 Announce Type: cross Abstract: Multi-contrast MR scans contain redundant structural information that can be leveraged during reconstruction and potentially accelerate acquisition t...

By Chinmay Rao, Efe Il{\i}cak, Matthias J. P. van Osch, Mariya Doneva, Laurens Beljaards, Navid Jabarimani, Nicola Pezzotti, Marius Staring