Molecular crystal structure prediction (CSP) is important in pharmaceuticals, agrochemicals, and organic electronics, where subtle differences in molecular conformation and packing can strongly affect...
uFlowCSP is a MeanFlow-based crystal structure prediction model that learns the average probability‑flow velocity, enabling it to generate complete crystal structures in one to five network evaluations. It achieves inference speeds 5×–58× faster than diffusion and flow‑matching methods while matching or surpassing their performance, with a chemistry‑ and symmetry‑aware Transformer that uses canonical atom ordering and per‑token chemistry embeddings. On the MP‑20 benchmark, uFlowCSP attains comparable or higher accuracy with far fewer evaluations and significantly lower wall‑clock time, demonstrating improved accuracy per network evaluation.
By Sourin Dey, Dipannoy Das Gupta, Lai Wei, Sadman Sadeed Omee, Jianjun Hu
arXiv:2601. 09285v2 Announce Type: replace Abstract: Metal-organic frameworks (MOFs) are porous crystalline materials with broad applications such as carbon capture and drug delivery, yet accurately predicting their 3D structures remains a significant challenge.
By Mianzhi Pan, JianFei Li, Peishuo Liu, Botian Wang, Yawen Ouyang, Yiming Rong, Hao Zhou, Jianbing Zhang
arXiv:2609.39773v1 Announce Type: new
Abstract: Crystal structure governs material properties, making crystal structure prediction (CSP) a fundamental problem in materials science. Generative models...
By Thomas Egg, Harry Winston Sullivan, Maya M. Martirossyan, Philipp H\"ollmer, Cheng Zeng, Adrian Roitberg, Mingjie Liu, Richard Hennig, Sapna Sarupria, Ellad B. Tadmor, Stefano Martiniani
Packora is a flow-based generative model designed for molecular crystal structure prediction (CSP). It jointly predicts atomic coordinates and lattice parameters from molecular graphs, supporting multi-component and organometallic crystals and allowing conditioning on conformers, stereochemistry, and space-group data. In evaluations inspired by the CCDC CSP blind test, Packora outperforms baselines on generation and ranking benchmarks, achieving superior matched-budget coverage, higher experimental-form recovery, lower ranks, and faster convergence.
By Nayoung Kim, Kiyoung Seong, Sungsoo Ahn
The paper introduces CrystAF, an all‑atom crystal flow‑map generation model, and evaluates where physics should be incorporated into generative crystal structure models. By applying physics‑informed post‑training, the authors improve molecular validity and crystal packing without altering sampling speed, while inference‑time corrections further refine the structures. The study demonstrates that post‑training and inference‑time physics are complementary, and that the post‑training approach transfers to other generators such as Clari‑M and MolCrystalFlow.
By Haocheng Tang, Junmei Wang, Wengong Jin
arXiv:2508. 02641v2 Announce Type: replace-cross Abstract: Molecular crystal structure prediction (CSP) is essential for applications in pharmaceuticals and organic electronics.
By Vahe Gharakhanyan, Yi Yang, Luis Barroso-Luque, Daniel S. Levine, Sushree Jagriti Sahoo, Brandon M. Wood, Kyle Michel, Muhammed Shuaibi, Gregory J. O. Beran, Viachaslau Bernat, Misko Dzamba, Xiang Fu, Meng Gao, Xingyu Liu, Benjamin K. Miller, Keian Noori, Lafe J. Purvis, Tingling Rao, Ammar Rizvi, Matt Uyttendaele, Andrew J. Ouderkirk, Chiara Daraio, C. Lawrence Zitnick, Arman Boromand, Noa Marom, Zachary W. Ulissi, Anuroop Sriram
The study benchmarks 12 deep generative crystal structure prediction models against the template-based TCSP 2.0 on 180 test structures, finding that template retrieval achieves the highest top‑1 success (68.3%). Most generative predictions overlap with template substitutions, and removing entire stoichiometric prototype families from training reduces accuracy by 50‑78%, indicating strong prototype dependence. Only a small subset of predictions remain after such removal, suggesting limited genuine de‑novo capability.
By Lai Wei, Rongzhi Dong, Ying Feng, Madeline Miklos, Jianjun Hu
arXiv:2510. 16165v2 Announce Type: replace Abstract: A key question in benchmarking generative crystal reconstruction models is how the amount and type of crystallographic information provided to a generative model affects its ability to reconstruct atomic structures.
By Charles Rhys Campbell, Aldo H. Romero, Kamal Choudhary
arXiv:2606. 00794v1 Announce Type: cross Abstract: Merging first-principles calculations with machine learning (ML), we aim to accelerate the exploration of catalytic behaviour in novel materials.
By Pavlo Melnyk, Anmar Karmush, M{\aa}rten Wadenb\"ack, Ania Beatriz Rodr\'iguez-Barrera, Johanna Rosen, Michael Felsberg, Jonas Bj\"ork
arXiv:2607. 28553v1 Announce Type: new Abstract: Predicting the 3D structures of atomic systems is fundamental to advancing material science and drug discovery.
By Shentong Mo, Yatao Bian
EP-Flow introduces a new framework for predicting disordered crystal structures without requiring site-level disorder annotations. It uses an Occupancy Distribution Matrix (ODM) to represent continuous site-by-species occupancies and enforces constraints through a transportation polytope. The method jointly generates occupancies, fractional coordinates, and lattice parameters, achieving state‑of‑the‑art performance on formula‑conditioned disordered CSP benchmarks and recovering chemically meaningful local disorder patterns.
By Qiuliang Liu, Liming Wu, Qi Li, Zhonglong Peng, Chang Chen, Xiaolong Chen, Wenbing Huang, Shifeng Jin