arXiv AI

Robustifying pathology foundation models via fine-tuning

arXiv:2607. 22861v1 Announce Type: cross Abstract: Pathology foundation models (FMs) produce powerful tile-level representations which remain sensitive to scanner and staining variability, undermining deployment across laboratories.

arXiv Machine Learning
Jul 27

Atlas 2 -- Foundation models for clinical deployment

arXiv:2601. 05148v2 Announce Type: replace-cross Abstract: Pathology foundation models substantially advanced the possibilities in computational pathology --- yet tradeoffs in terms of performance, robustness, and computational requirements remained, which limited their clinical deployment.

By Maximilian Alber, Timo Milbich, Alexandra Carpen-Amarie, Stephan Tietz, Jonas Dippel, Lukas Muttenthaler, Beatriz Perez Cancer, Alessandro Benetti, Panos Korfiatis, Elias Eulig, J\'er\^ome L\"uscher, Jiasen Wu, Sayed Abid Hashimi, Gabriel Dernbach, Simon Schallenberg, Neelay Shah, Moritz Kr\"ugener, Aniruddh Jammoria, Jake Matras, Patrick Duffy, Matt Redlon, Philipp Jurmeister, David Horst, Lukas Ruff, Klaus-Robert M\"uller, Frederick Klauschen, Andrew Norgan
arXiv AI
Aug 5

A Deployment-Friendly Foundational Framework for Efficient Computational Pathology

arXiv:2602. 14010v2 Announce Type: replace-cross Abstract: Pathology foundation models (PFMs) generalize well across computational pathology tasks but remain costly for gigapixel whole-slide image analysis.

By Yu Cai, Cheng Jin, Zhengyu Zhang, Jiabo Ma, Fengtao Zhou, Yingxue Xu, Zhengrui Guo, Yihui Wang, Zhengyu Zhang, Ling Liang, Yonghao Tan, Pingcheng Dong, Du Cai, On Ki Tang, Chenglong Zhao, Zhijian Cen, Ying Tan, Xi Wang, Can Yang, Yali Xu, Jing Cui, Zhenhui Li, Ronald Cheong Kin Chan, Yueping Liu, Feng Gao, Xiuming Zhang, Li Liang, Hao Chen, Kwang-Ting Cheng
arXiv AI
Jul 13

ALICE: Learning a General-Purpose Pathology Foundation Model from Vision, Vision-Language, and Slide-Level Experts

arXiv:2607. 09526v1 Announce Type: cross Abstract: Foundation models are reshaping computational pathology, yet their capabilities remain shaped by pretraining objectives, data sources, and spatial scales, fragmenting complementary expertise across separate backbones.

By Jiawen Li, Tian Guan, Huijuan Shi, Xitong Ling, Mingxi Fu, Anjia Han, Chao He, Yonghong He
arXiv Machine Learning
Jul 10

Data Alchemy: Mitigating Cross-Site Model Variability Through Test Time Data Calibration

arXiv:2407. 13632v2 Announce Type: replace-cross Abstract: Deploying deep learning-based imaging tools across various clinical sites poses significant challenges due to inherent domain shifts and regulatory hurdles associated with site-specific fine-tuning.

By Abhijeet Parida, Antonia Alomar, Zhifan Jiang, Pooneh Roshanitabrizi, Austin Tapp, Maria Ledesma-Carbayo, Ziyue Xu, Syed Muhammed Anwar, Marius George Linguraru, Holger R. Roth