arXiv AI By Nooshin Maghsoodi, Amoon Jamzad, Robert Policelli, Mohammad Farahmand, Dilakshan Srikanthan, Martin Kaufmann, Kevin Y. M. Ren, Shaila Merchant, Sonal Varma, Ross Walker, Doug McKay, John Rudan, Gabor Fichtinger, Parvin Mousavi

Agent-Guided Relational Concept Discovery: Toward Interpretable Surgical Margin Assessment

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arXiv:2607. 21437v1 Announce Type: new Abstract: Deep learning models can effectively use Rapid Evaporative Ionization Mass Spectrometry (REIMS) data for surgical margin assessment.

Machine-generated by The Flow from the publisher's headline and feed description — not written or checked by a human. The full article lives at arXiv AI.

arXiv Machine Learning
Oct 8

Beyond Explanation: Debugging Medical Imaging Models via Concept Intervention

The paper presents a plug‑and‑play framework that uses concept-based interpretation to debug medical imaging models. By aligning a single‑modality encoder with BioMedCLIP, the authors build a Concept Bottleneck Model that allows concept‑level interventions to distinguish causal from spurious features. Experiments on Mayo Clinic ultrasound and CheXpert chest X‑ray data show that these interventions can reliably diagnose model issues and even improve performance through guided fine‑tuning.

By Samrajya Thapa, Daniel J. Quest, Timothy L. Kline, Carrie L. Langstraat, Emanuel C. Trabuco, Wei Le
arXiv Computer Vision
Aug 25

Can Coding Agents Build Robust Baselines? A Skill-Based Approach for Automating the Medical Imaging Model-Development Pipeline

The paper introduces an agentic AI Scientist workflow that automates the entire baseline development process for medical imaging by combining literature-guided reasoning, automated code generation, and hypothesis-driven experimentation. Evaluated on four public benchmarks covering segmentation, classification, and detection, the pipeline consistently improves validation performance, achieving competitive leaderboard results such as 6th place on both PUMA tracks and 31st on MILK10k. The approach also shows strong domain generalization on MIDOG25 across scanners, tumor types, and species, demonstrating that a skill-based, literature-guided agentic workflow can reduce engineering effort without task-specific redesign.

By Eugenia Moris, Jos\'e Ignacio Orlando
arXiv AI
Aug 11

Biologically Informed Representation Learning for Robust Cross-Center Generalization of MALDI-TOF Mass Spectrometry

arXiv:2608. 08182v1 Announce Type: cross Abstract: Machine learning models for MALDI-TOF mass spectrometry have shown considerable promise for clinical microbiology tasks such as microbial identification and antimicrobial resistance prediction.

By Alejandro L. Garc\'ia-Navarro, Carlos Sevilla-Salcedo, Bel\'en Rodr\'iguez-S\'anchez, Vanessa G\'omez-Verdejo
arXiv Computer Vision
Sep 28

LadderMIL: Multiple Instance Learning with Coarse-to-Fine Self-Distillation

arXiv:2502.02707v5 Announce Type: replace Abstract: Multiple Instance Learning (MIL) for whole slide image (WSI) analysis in computational pathology often neglects instance-level learning as supervis...

By Shuyang Wu, Yifu Qiu, Ines P. Nearchou, Sandrine Prost, Jonathan A. Fallowfield, Hideki Ueno, Hitoshi Tsuda, David J. Harrison, Hakan Bilen, Timothy J. Kendall