Instance-level explanations aim to reveal the rationale behind a model's decisions for a specific graph. Previous methods explain graph neural networks (GNNs) by selecting important edges to induce subgraphs, where edge importance is assessed by perturbing each edge and observing changes in the model predictions.
arXiv:2606. 05756v1 Announce Type: new Abstract: Graph Neural Networks (GNNs) have demonstrated remarkable performance across a range of applications involving graph-structured data, particularly in high-stakes domains.
By Jialiang Yin, Zheng Zhao, Linsey Pang, Bo Dong, Bin Shi, Jiaxing Zhang
The paper presents a comparative analysis of six state‑of‑the‑art counterfactual explainers for graph neural networks, focusing on methods that can both add and remove edges to alter model predictions. It evaluates these explainers across diverse real‑world and synthetic datasets, covering binary and multi‑class graph and node classification tasks, using a range of quantitative and qualitative metrics. The study highlights the trade‑offs between explanation size, coverage, and quality, aiming to pinpoint each method’s strengths and weaknesses to inform future research.
By Maria Myrto Villia, Filippos Gouidis, Theodore Patkos, Panos Trahanias
arXiv:2606. 03495v1 Announce Type: new Abstract: Heterogeneous graph neural networks (HGNNs) have demonstrated remarkable performance in modeling complex relational data, however their interpretability in high-stakes applications remains a critical challenge.
By Zongrui Li, Yuhang Zhao, Ying Zhao, Yuanzhao Guo, Qiang Huang, Yuan Tian
The paper introduces MGHRL, a framework for hypergraph representation learning that adapts hyperedge granularity through a granular-ball splitting strategy. It constructs hyperedges at multiple levels of detail, capturing high-order relationships tailored to the graph’s topology. A multi-granularity hypergraph network then processes these hyperedges with sub-networks and hierarchical reversible connections, achieving superior performance on benchmark datasets.
By Sen Zhao, Yifan Guan, Jinyuan Ni, Gaojie Xu, Zhang Xu, Xiaoyu Lian, Yi Liu, Yi Wang, Wei Wang
arXiv:2606. 29773v1 Announce Type: new Abstract: Graphs are widely used to model relational systems, with applications in domains such as social networks, finance, and biomedicine.
By Haoxin Sun, Yiqing Lin, Yajun Huang, Chenhui Dong, Mingjun Li, Zhongzhi Zhang
Graph Machine Learning as a Service platforms now offer explainability interfaces to satisfy regulatory transparency, but this transparency can be exploited. The paper introduces a novel model extraction attack for graph classification that operates under strict black‑box constraints, using only discrete class labels and binary explanation masks. The method guides Monte Carlo edge sensitivity estimation toward decision boundaries with Hoeffding guarantees and narrows the search space using explanation subgraphs, outperforming comparable baselines on benchmark datasets.
By Ojas Nimase, Jiate Li, Yue Zhao, Yushun Dong
arXiv:2607. 04600v1 Announce Type: new Abstract: Graph eXplainable AI (G-XAI) is increasingly important for making Graph Neural Networks interpretable and accountable.
By Francesco Paolo Nerini, Mirko Zaffaroni, Paolo Baracco, Gabriele Ciravegna, Alan Perotti
arXiv:2605. 15511v2 Announce Type: replace Abstract: Graph Neural Networks (GNNs) have become the dominant framework for inductive graph-level learning.
By Louisa Cornelis, Johan Mathe, Louis Van Langendonck, Guillermo Bern\'ardez, Nina Miolane
DeltaGNN introduces an information flow control mechanism that uses a new connectivity measure, the information flow score, to mitigate over‑smoothing and over‑squashing in Graph Neural Networks. This approach enables linear computational and memory overhead while effectively capturing both short‑range and long‑range node interactions. Experiments on ten diverse real‑world datasets demonstrate superior performance with limited computational complexity.
By Kevin Mancini, Islem Rekik
arXiv:2607. 29115v1 Announce Type: cross Abstract: Link prediction aims to identify potential or future connections within a given graph structure.
By Sen Zhao, Cheng Liu, Shuyin Xia, Zhiyuan Liu, Yi Liu, Yi Wang, Wei Wang
The survey titled "When Vision Meets Graphs: A Survey on Graph Reasoning and Learning" reviews how visual depictions of graphs can be used as inputs for graph reasoning and learning. It highlights that while Graph Neural Networks dominate graph machine learning, most pipelines ignore the visual form of graphs, despite scientists routinely interpreting graphs visually. The paper organizes existing work into three threads—vision for graph reasoning, vision for graph learning, and scientific graphs—aiming to clarify current capabilities and chart a path toward foundation models that perceive and reason about graphs like scientists do.
By Xinjian Zhao, Wei Pang, Zhixuan Yu, Xiangru Jian, Xiaozhuang Song, Yaoyao Xu, Zhongkai Xue, Dingshuo Chen, Shu Wu, Philip Torr, Tianshu Yu