arXiv AI

Mutual Distillation of Dual-Foundation Models for Semi-Supervised PET/CT Segmentation

arXiv:2606. 15611v1 Announce Type: cross Abstract: Organ segmentation from PET/CT is critical for quantitative analysis and radiotherapy planning in oncology.

arXiv Computer Vision
Aug 21

MUST-PET: MUltimodal Self-supervised learning across Tracers for whole-body PET/CT-based lesion segmentation

arXiv:2608. 19666v1 Announce Type: new Abstract: Deep learning-based whole-body PET-CT lesion segmentation can support cancer staging, treatment planning, and response assessment, but generalization is limited by scarce annotations and domain shifts.

By Bashirul Azam Biswas, Amartya Bhattacharya, Biratal Raj Wagle, Matthew E. Maeder, James B. Yu, Indrani Bhattacharya
arXiv Computer Vision
Sep 24

nnFoundation: 3D Foundation Models for Radiology

nnFoundation introduces complementary convolutional and transformer-based 3D foundation models for radiology, trained on 2.1 million CT, MRI, and PET volumes from 125 datasets. The models are evaluated on 108 tasks—including segmentation, detection, classification, report generation, and image retrieval—under domain shift, low-data, and low-compute scenarios, consistently outperforming prior 3D foundation models and training from scratch. Performance varies by task type, with convolutional models excelling at spatially localized tasks and transformer models at global semantic reasoning, and dynamic alignment with dataset characteristics further enhances transferability.

By Constantin Ulrich Harsy, Tassilo Wald, Karol Gotkowski, Yannick Kirchhoff, Marcel Knopp, Maximilian Rokuss, Elisa Stegmeier, Philipp Schader, Dasha Trofimova, Raphael Stock, Kim-Celine Kahl, Stephen Schaumann, Selen Erkan, David Zimmerer, Stefan Denner, Moritz Langenberg, Sebastian Ziegler, Katharina Eckstein, Maximilian Fischer, Jonathan Suprijadi, B\'alint Kov\'acs, Benjamin Hamm, Anand Deshpande, Dimitrios Bounias, Nico Disch, Shuhan Xiao, Jessica K\"achele, Jan Sellner, Rajesh Baidya, Jeremias Traub, Lars Kr\"amer, Maximilian Zenk, Tim R\"adsch, Stefan Dvoretskii, Robin Peretzke, Jonathan Deissler, Alexandra Ertl, Partha Ghosh, Kris Dreher, Stefan Dinkelacker, Annika Reinke, Evangelia Christodoulou, Numan Saeed, Yoland Savriama, Santiago Estrada, David K\"ugler, Laura Alexandra Daza Barragan, Cristina Isabel Gonzalez Osorio, Jan Peeken, Michael Baumgartner, Marvin Teichmann, Guillaume Chabin, Matthias Kirchler, Valentin Koch, for the ALFA study, Markus Hohenhaus, Dimitri Koslov, Nina Decker, Mohammad Yaqub, Arnd Heuser, Martin Reuter, Julia A. Schnabel, Tobias Heimann, Florin Ghesu, Paul Brachmann, Claus P. Heu{\ss}el, Alexander Radbruch, Gianluca Brugnara, Aditya Rastogi, Martha Foltyn-Dumitru, Heinz-Peter Schlemmer, Ignaz Reicht, Julius C. Holzschuh, Michael Bach, Bram Stieltjes, Kai Schlamp, Lena Maier-Hein, Marco Nolden, Ralf Floca, Paul F. J\"ager, Philipp Vollmuth, Fabian Isensee, Klaus H. Maier-Hein
arXiv Computer Vision
Sep 14

Uni-Light: An Ultra-Lightweight Framework via Uncertainty-Aware Knowledge Distillation for Brain Tumour Segmentation

arXiv:2609.06729v2 Announce Type: replace Abstract: Accurate 3D brain tumour segmentation from multi-modal Magnetic Resonance Imaging (MRI) is essential for clinical diagnosis and treatment planning....

By Libing Kuang, Soren Salehi, Ziling Wu, Ahmad P. Tafti, Armaghan Moemeni
arXiv AI
Sep 18

Optimal Transport Metric Learning for Feature Alignment in Partially Supervised Segmentation

The paper proposes a two‑stage learning framework for multi‑organ segmentation that handles partially annotated datasets and domain shifts. First, the model learns accurate segmentations from available annotations to build robust feature representations. Second, it introduces learnable organ prototypes and a Sinkhorn‑triplet loss to enforce organ‑wise feature consistency across datasets, keeping embeddings of the same organ close while separating different organs, even when annotations are missing.

By Dakini Mallam Garba, Salim Abdou Daoura
Hugging Face Trending Papers
Jul 2

Embracing Intra-Class Heterogeneity for Semi-Supervised Medical Image Segmentation: From Diversity to Precision

Due to the scarcity of expert-annotated data, Semi-Supervised Medical Image Segmentation (SSMIS) has emerged as a promising approach. Many anatomical structures in medical images exhibit significant intra-class heterogeneity, with different regions showing heterogeneous intensity patterns within the same structure.

arXiv Computer Vision
Sep 4

MetaStructAtlas: A Grounded 3D Vision-Language Dataset and Benchmark for Functional and Structural Reasoning in Whole-Body PET/CT

MetaStructAtlas is a large-scale dataset for whole-body PET/CT interpretation that combines multimodal imaging with integrated anatomical, metabolic, and semantic annotations. It includes 490 co-registered 3D PET and CT volumes, 50,470 organ-level segmentation masks, and grounded radiology reports. The accompanying MetaStructVQA benchmark offers 100,565 QA pairs that link diagnostic queries to visual evidence across modalities, enabling interactive 3D grounded visual question-answering.

By Chenguang Zheng, Le Xue, Yichi Zhang, Wenbo Zhang, Zehui Ling, Gang Feng, Xin Gao, Yuan Qi, Yuan Cheng, Zixin Hu, Mei Tian