arXiv AI

MalariAI: A Label-Resilient Decoupled Framework for Universal Cell Segmentation and Explainable Stage Classification in Dense Malaria Blood Smears

arXiv:2607. 00385v1 Announce Type: cross Abstract: Automated malaria diagnosis from blood smear microscopy is a critical challenge in global health AI; in resource-limited settings, the scarcity of expert microscopists remains the primary bottleneck to timely and accurate diagnosis.

arXiv Computer Vision
Aug 26

EMFE: A lightweight, explainable machine learning framework for malaria cell classification

EMFE (Efficient Mathematical Feature Extraction) is a lightweight, explainable machine‑learning framework that classifies single red‑blood‑cell images as parasitized or uninfected using five engineered features: Gray World color normalization, adaptive green‑channel thresholding, morphological spot detection, and classical classifiers. On the NIH LHNCBC malaria dataset (27,558 images from 200 patients), a tuned Random Forest achieved 94.6% pooled out‑of‑fold accuracy, 94.3% on a 40‑patient holdout, and outperformed deep‑learning baselines in an accuracy‑efficiency trade‑off. Ablation studies, synthetic perturbations, and explainability analyses identified spot saturation as the dominant discriminative feature and quantified the framework’s failure modes and patient‑level performance.

By Md Abdullah Al Kafi, Walayat Hussain, Mousumi Karmakar, Sumit Kumar Banshal, Ahmed Al Marouf
arXiv Machine Learning
Jul 21

SGMCE: Segment-Grounded Morphological Concept Explanation for Malaria Parasite Species Identification in Thick Blood Smears

arXiv:2607. 16324v1 Announce Type: cross Abstract: Malaria diagnosis in endemic regions depends on species-level identification of Plasmodium parasites in thick blood smears, but deep learning detectors classify detections without providing morphological evidence for their predictions, limiting the ability of microscopists to audit those predictions at the case level.

By Ahmed Tahiru Issah, Charles B. Delahunt, Carine Mukamakuza
arXiv AI
Sep 25

CoSWA-YOLOv12: Scale-Invariant Tiny Object Detection and Segmentation of Malaria Parasites

CoSWA-YOLOv12 is a compact YOLOv12 instance‑segmentation detector designed to improve detection of tiny malaria parasites in microscopy images. It introduces a Cooperative Scale‑adaptive Wasserstein Assignment that applies a Wasserstein distance‑based label assignment inversely proportional to object size, a wavelet detail residual, and a min‑max Gaussian regression loss, all of which preserve pretrained weights. On a five‑class Rwandan thick‑smear dataset, the method raises P. falciparum recall from 0.63 to 0.74, increases mAP@50 from 0.73 to 0.81, and reduces missed detections from 38% to 15%.

By Ahmed Tahiru Issah, Carine Mukamakuza
arXiv AI
Sep 25

Investigating White Blood Cells as a Source of False-Positive Malaria Parasite Detection in African Blood-Smear Images

The study examined whether white blood cells (WBCs) cause false‑positive malaria detections in Giemsa‑stained blood smears. Two YOLOv12 models—one trained only on parasite labels and another on both parasite and WBC labels—were evaluated on 8,000 images from Uganda and Ghana. Across seven spatial and statistical tests, false positives did not cluster near WBCs; instead, most were background detections, and the multi‑task model (with WBC labels) performed better overall, suggesting that WBC labeling alone does not reduce false positives but that stain artifacts and unannotated ring forms are the true sources of error.

By Samuel A. Adeniji, Goodness C. Obasi, Chris-Victor Ntwali, Aondana M. Iorumbur, Confidence Raymond, Lowami Uwimana, Ahmed Tahiru Issah
arXiv Computer Vision
4d ago

HERO: Histology Encoder for Robust Representation in Oncology

HERO (Histology Encoder for Robust Representation in Oncology) is a ViT‑G/14 pathology foundation model trained with DINO and iBOT objectives and refined using high‑resolution Gram anchoring on a 500‑million‑tile corpus from about 575,000 clinical whole‑slide images. It demonstrates superior robustness to center, scanner, and stain variation compared to other state‑of‑the‑art foundation models, while maintaining competitive performance on tile‑level classification, segmentation, and gene‑expression prediction. Across 39 slide‑level clinical tasks, HERO ranks first on average and achieves the best average rank across six benchmark frameworks under an equal‑weighted analysis.

By Zhi Li (Caris Life Sciences, Irving, TX, United States), Eghbal Amidi (Caris Life Sciences, Irving, TX, United States), Yating Cheng (Caris Life Sciences, Irving, TX, United States), Tyson Dawson (Caris Life Sciences, Irving, TX, United States), Gorkem Can Ates (Caris Life Sciences, Irving, TX, United States), Shuzhen Kuang (Caris Life Sciences, Irving, TX, United States), Norsang Lama (Caris Life Sciences, Irving, TX, United States), Md Ashequr Rahman (Caris Life Sciences, Irving, TX, United States), Zhiying Lu (Caris Life Sciences, Irving, TX, United States), Elisabeth K. Kong (Caris Life Sciences, Irving, TX, United States), Milan Radovich (Caris Life Sciences, Irving, TX, United States), David Spetzler (Caris Life Sciences, Irving, TX, United States), Matthew Oberley (Caris Life Sciences, Irving, TX, United States), George W. Sledge (Caris Life Sciences, Irving, TX, United States), Ming Chen (Caris Life Sciences, Irving, TX, United States)
arXiv AI
Aug 18

Comprehensive Benchmarking of Deep Learning Architectures for Lung Cancer Histopathology

arXiv:2608. 15915v1 Announce Type: cross Abstract: Lung cancer remains the leading cause of cancer-related mortality worldwide, while histopathological diagnosis is often affected by inter-observer variability and the substantial workload associated with manual slide examination.

By Hadi Hasan, Safaa Salman, Lama Sleem, Ralph Mouawad, Ali Chehab
arXiv Machine Learning
Aug 12

Retrieval-Augmented Vision Foundation Models for Robust Leukemia Cell Classification across Multiple Microscopy Datasets

arXiv:2608. 10657v1 Announce Type: cross Abstract: Leukemia cell image classification is challenged by real-world domain shifts from acquisition, staining, illumination, and site protocols, causing single-dataset models to generalize poorly in real clinical scenarios.

By Carlos Zamora, Hiram Zuniga, Ulises Orozco-Rosas, Kenia Picos
arXiv AI
Jun 17

SegTME-UNI2: A Foundation Model-Based Framework for Generalisable Multiclass Cell Segmentation and LLM-Driven Tumour Microenvironment Characterisation in Histopathology

arXiv:2606. 17702v1 Announce Type: cross Abstract: Characterising the tumour microenvironment (TME) from routine H&E-stained histology images requires simultaneous cell segmentation, feature extraction, and interpretable clinical reporting.

By Wan Siti Halimatul Munirah Wan Ahmad, Faris Syahmi Samidi, Mohammad Badal Ahmmed, Vimal Angela Thiviyanathan, Selvam James Thavaraj, Anwar P. P. Abdul Majeed
arXiv Computer Vision
Sep 4

Solving the Needle-in-a-Haystack Problem in Mammography Vision-Language Model with Differentiable Subset Sampling

The paper introduces TopKSigLIP, a vision‑language model tailored for mammography that tackles two key challenges: high‑resolution imaging and homogeneous radiology reports. It replaces standard CLIP training with a TopK‑Patch module that selects sparse high‑resolution patches likely to contain lesions, and a Sup‑sigmoid loss that uses soft labels from structured data instead of contrastive loss. TopKSigLIP outperforms existing open‑source mammography and general medical VLMs on zero‑shot tasks such as density assessment, BI‑RADS classification, finding subtyping, and cancer prediction, while also providing better lesion localization than Grad‑CAM.

By Young Seok Jeon, Beatrice Brown-Mulry, Rohan Satya Isaac, Anjana Dissanayaka, Theo Dapamede, Mohammadreza Chavoshi, Judy Gichoya, Hari Trivedi
arXiv Computer Vision
Sep 22

AdaptiveCDM: Source-Free Few-Shot Domain Adaptation for Cell Detection in Microscopic Images

AdaptiveCDM is a modular framework for source‑free few‑shot domain adaptation in cell detection, enabling a pretrained model to adapt to new imaging domains using only a handful of labeled target images and no source data. It combines Resolution‑Aware Augmentation (RAug) to balance scarce, class‑imbalanced samples while preserving cellular morphology, and Category‑Aware Representation Learning (CARL) to strengthen class‑consistent proposals for better localization and classification. Experiments on M5 and Raabin‑WBC datasets show that AdaptiveCDM achieves competitive or superior mAP scores compared to state‑of‑the‑art methods under their respective supervision settings.

By Nimra Dilawar, Sara Nadeem, Javed Iqbal, Waqas Sultani, Mohsen Ali