The rapid growth of biomedical knowledge has made the validation of automatically generated biological annotations a major bottleneck in biomedical curation. While computational methods can rapidly produce large numbers of candidate annotations, determining which are biologically valid still requires costly expert review.
arXiv:2606. 15412v1 Announce Type: cross Abstract: Biomedical relation extraction (BioRE) is a key step in transforming biomedical literature into structured knowledge.
By Jakob Mraz, Toma\v{z} Curk, Bla\v{z} Zupan
arXiv:2608. 02692v1 Announce Type: new Abstract: Access to holistic, multimodal data improves the performance of Artificial Intelligence (AI) in medical classification tasks compared to utilizing single modalities or data sources.
By Julia Gehrmann, Lars Quakulinski, Hamza Naseem, Oya Beyan
arXiv:2606. 01617v1 Announce Type: cross Abstract: Large language models excel at general tasks but underperform smaller supervised models in specialized, high-stakes domains where training labels are costly.
By Tianyi Xu, Yaolun Zhang, Xuan Ouyang, Huazheng Wang
Large language models excel at general tasks but underperform smaller supervised models in specialized, high-stakes domains where training labels are costly. We address this regime with EvoPool, an evolutionary multi-agent framework inspired by Darwinian evolution.
Transformer models for high-dimensional omics analysis process thousands of genes or pathways, although only a subset requires deep computation. Mixture-of-Recursions (MoR) improves efficiency through adaptive token-choice or expert-choice routing.
arXiv:2604. 09737v2 Announce Type: replace-cross Abstract: Structured prediction with large language models requires outputs that are label-accurate, ontology-constrained, structurally valid, and evidence-grounded under label imbalance and heterogeneous group difficulty.
By Samah Fodeh, Ganesh Puthiaraju, Elyas Irankhah, Afshan Khan, Sreeraj Ramachandran, Linhai Ma, Srivani Talakokkul, Sarah Schellhorn
arXiv:2608. 06727v1 Announce Type: new Abstract: Transformer models for high-dimensional omics analysis process thousands of genes or pathways, although only a subset requires deep computation.
By Koushik Howlader, Tirtho Roy, Md Tauhidul Islam, Wei Le
arXiv:2608. 15382v1 Announce Type: new Abstract: Large language models (LLMs) are increasingly proposed for healthcare decision support, but their evaluations still reward single-answer accuracy rather than reasoning about interventions, mechanisms, harms, evidence, and uncertainty.
By Ummara Mumtaz, Aimen Noor, Awais Ahmed
arXiv:2607. 18465v1 Announce Type: new Abstract: Crowdsourced labeling provides valuable labeled data for domains across natural language processing, computer vision, and video.
By Ju Chen, Sijia Xu, Jun Feng, Zhiqiang Gao, Zhengyi Yang
arXiv:2508. 10971v2 Announce Type: replace-cross Abstract: Knowledge graphs (KGs) can be enhanced through rule mining; however, the resulting logical rules are often difficult for humans to interpret due to their inherent complexity and the idiosyncratic labeling conventions of individual KGs.
By Nasim Shirvani-Mahdavi, Chengkai Li
arXiv:2606. 08800v1 Announce Type: new Abstract: In high-stakes settings such as brand compliance, clinical care, and content moderation, machine learning cannot be deployed as opaque oracles: practitioners inspect the features driving model decisions, and models must leverage the expert documentation governing these domains.
By Varun Khurana, Vijval Ekbote, Vashu Chauhan, Yaman Kumar Singla, Rajiv Ratn Shah, Balaji Krishnamurthy