arXiv:2607.03863v3 Announce Type: replace
Abstract: Artificial intelligence has advanced scientific discovery, but most AI4Science systems remain fragmented tools that rely on humans to coordinate pr...
By Yining Zheng, Yuxin Wang, Jiahao Lu, Shicheng Fang, Weiyi Wang, Yongzhuo Yang, Bowen Li, Haochen Ma, Chen Hu, Bowen Chen, Yang Wang, Huanhui Chen, Yitong Chen, Jiajun Chen, Zhiyuan Li, Yanlin Li, Zhuo Yang, Qifeng Wu, Jiaying He, Zhijie Jinluo, Xiaohu Xu, Yi Feng, Juncheng Qian, Yizhou Chen, Yang Cheng, Tong Zhu, Tianlei Ying, Hongyu Yu, Hongjun Xiang, Xipeng Qiu
PAPERBENCHX is a new benchmark that tests whether AI can reproduce scientific experiments across 12 disciplines, including electromagnetics, photonics, chemistry, materials science, biology, and robotics. It consists of 93 expert-constructed tasks, each providing a source paper, a public specification, and a domain-native scientific environment. The benchmark evaluates AI agents by having them reconstruct, execute, and diagnose key experiments, then replay submissions from scratch to score regenerated evidence against expert-validated criteria, revealing that current AI configurations fully reproduce only 14% of tasks.
By Ruoyu Wu, Zengji Tu, Aolong Sun, Tianyi Ma, Junren Li, Xinbo Xu, Li Fu, Ziyan Zhang, Pinrui Huang, Xiaochen Wang, Chengda Wu, Yutao Zhou, Jianjun Wu, Lin Chang, Baobao Chang, Liang Chen, Kuan Li
arXiv:2502. 18864v2 Announce Type: replace Abstract: Scientific discovery is driven by scientists generating novel hypotheses for complex problems that undergo rigorous experimental validation.
By Juraj Gottweis, Wei-Hung Weng, Alexander Daryin, Tao Tu, Petar Sirkovic, Artiom Myaskovsky, Grzegorz Glowaty, Felix Weissenberger, Alessio Orlandi, Dan Popovici, Anil Palepu, Keran Rong, Ryutaro Tanno, Khaled Saab, Fan Zhang, Jacob Blum, Andrew Carroll, Kavita Kulkarni, Nenad Tomasev, Dina Zverinski, Ivor Rendulic, Elahe Vedadi, Florian Hasler, Luka Rimanic, Marina Boia, Ivan Budiselic, Ben Feinstein, Mathias Bellaiche, Tom Sheffer, Jan Freyberg, Jeremy Ratcliff, Ottavia Bertolli, Katherine Chou, Avinatan Hassidim, Burak Gokturk, Amin Vahdat, Yuan Guan, Vikram Dhillon, Eeshit Dhaval Vaishnav, Byron Lee, Tiago R D Costa, Jos\'e R Penad\'es, Gary Peltz, Yossi Matias, James Manyika, Demis Hassabis, Yunhan Xu, Pushmeet Kohli, Annalisa Pawlosky, Alan Karthikesalingam, Vivek Natarajan
MatOS is an agent operating system designed to streamline materials research by organizing data, knowledge, tools, and workflows into reusable assets. It features a layered scientific asset graph, a stateful adaptive workflow that tracks and resumes tasks, and an evidence-driven asset evolution mechanism that updates assets based on execution records and user feedback. In benchmark tests, MatOS outperforms existing agents and has successfully narrowed millions of candidate structures to a few promising solid-electrolyte and halide variants, demonstrating its effectiveness in long, multistage materials studies.
By Dingyang Lyu, Jing Gao, Zhonghao Chang, Jingjie Huang, Xiangran Cheng, Xin He, Yongda Huang, Zefeng Li, Jiahui Liu, Jian Wen, Feng Yu, Bonan Zhu, Yongheng Li, Hongwei Du, Baole Wei, Ziheng Lu
The paper introduces ScientistTwo, a fully autonomous multi‑agent framework that takes a scientific problem, establishes baselines, generates hypotheses, and coordinates specialized agents to conduct an end‑to‑end discovery cycle without human intervention. It rigorously tests and refines its methods through automated experiments, ablation studies, and a closed‑loop peer‑review engine. Benchmarking against top conferences (ICLR, ICML, NeurIPS) shows that ScientistTwo produces expert‑level, publishable papers and codebases that outperform human state‑of‑the‑art models and receive higher review ratings under automated AI review.
By Jaehyun Nam, Jinsung Yoon, Yanzhou Pan, Yubo Wang, Rui Meng, Parthasarathy Ranganathan, Tomas Pfister
arXiv:2608. 06961v1 Announce Type: new Abstract: Early-stage molecular design is an iterative process, not just a task of generating molecules.
By Zhu Wang, Jiangyu Chen, Yingjun Shang, Yuhui Yao, Laiao Lu, Tianfan Fu, Na Zou
MoLRSI is a recursive self‑improving AI agent designed for molecular discovery that optimizes both workflow and model architecture using persistent cross‑task memory. It refines its search policy based on workflow performance, refinement outcomes, and execution feedback, enabling continuous improvement. In antibiotic discovery, MoLRSI achieved a 15.9% experimental hit rate versus 8.7% for an expert‑led workflow, and in de novo peptide‑MHC binder design it produced eight validated hits with preferential binding, outperforming a baseline approach.
By Yikun Zhang, Xiwei Cheng, Mingze Yuan, Yu Zhang, Brian Shim, Aarti Krishnan, Daniel Rosen, Kunyang Sun, Yingze Wang, Zhenfeng Deng, Botao Yu, Bingxu Liu, David Liu, Tianyu Liu, Yuanqi Du, Nir Hacohen, James J. Collins, Wengong Jin
arXiv:2607. 02329v1 Announce Type: new Abstract: Autonomous-research agents have demonstrated end-to-end LLM automation in machine-learning sandboxes where execution provides calibration.
By Haonan Huang
arXiv:2608. 02642v1 Announce Type: cross Abstract: Accelerating scientific discovery is among the most consequential applications of AI, and computational biomolecular simulation stands out as a particularly promising target within this broader effort.
By Nithishwer Mouroug Anand, Wei-Tse Hsu, Kyle Vaccaro, Eden James Gage, Jonathan David Colburn, Linda Xi Phan, Minjoon Seo, Kevin Guan, Philip C. Biggin
arXiv:2601. 13508v4 Announce Type: replace-cross Abstract: Autonomous agents are beginning to transform scientific research from tool-assisted workflows toward self-sustaining discovery processes.
By Honghao Chen, Jiangjie Qiu, Yi Shen Tew, Xiaonan Wang
arXiv:2606. 01316v1 Announce Type: new Abstract: Scientific discovery demands intelligence, perseverance, and serendipity across vast search spaces.
By Zhe Zhao, Haibin Wen, Yingcheng Wu, Jiaming Ma, Yifan Wen, Jinglin Jian, Jiacheng Ge, Xiangru Tang, Bo An, Ming Yin, Sanfeng Wu, Mengdi Wang, Le Cong
arXiv:2608. 11224v1 Announce Type: new Abstract: Materials research advances through accumulated experience - scripts that work, protocols that are trusted, warnings attached to failed calculations or experiments, and judgement that links a new question to an old result.
By Siyu Liu, Bo Hu, Beilin Ye, He Cao, David J. Srolovitz, Tongqi Wen