arXiv:2609.06093v1 Announce Type: new
Abstract: Connectomes, graph-level maps of neurons and their synaptic connections, provide a structural basis for understanding how brain circuits support functi...
By Zhuolin Yu, Xingyu Liu, Yuanhao Jia, Yunhang Xiao, Hairuo Xue, Feihan Sun, Guozhang Chen
arXiv:2607. 07027v1 Announce Type: cross Abstract: While generative models enable encoding of complex neuroimaging data for feature generation and reconstruction, developing optimal architectural frameworks with appropriate encoding and latent space processes is crucial for studying structural and functional properties of the brain.
By Ishaan Batta, Meenu Ajith, Vince Calhoun
The paper introduces RGC‑Net, a Reservoir‑Based Graph Convolutional Network that combines fixed‑random reservoir dynamics with a structured convolutional framework for graph learning. It addresses limitations of existing reservoir‑based GNNs by adding a leaky integrator for better feature retention and a robust, adaptable architecture for graph classification and generation. Experiments demonstrate state‑of‑the‑art performance on classification and generative tasks, including dynamic brain connectivity, with faster convergence and reduced over‑smoothing.
By Mayssa Soussia, Gita Ayu Salsabila, Mohamed Ali Mahjoub, Islem Rekik
arXiv:2401. 14381v3 Announce Type: replace Abstract: We propose two graph neural network layers for graphs with features in a Riemannian manifold.
By Martin Hanik, Gabriele Steidl, Christoph von Tycowicz
The paper introduces an unsupervised framework that merges manifold learning with rank‑based interpretable graph embeddings to address the Geometric and Interpretability Gaps in visual representation learning. By first analyzing contextual information on the dataset manifold and then producing sparse, self‑explainable embeddings, the method achieves dimensionality reduction while preserving or improving performance in image retrieval and semi‑supervised Graph Convolutional Network classification. Experiments across varied datasets confirm that these context‑aware representations maintain high downstream effectiveness.
By Thiago C\'esar Castilho Almeida, Gustavo Rosseto Let\'icio, Vinicius Atsushi Sato Kawai, Daniel Carlos Guimar\~aes Pedronette
arXiv:2509. 22468v2 Announce Type: replace-cross Abstract: High-quality molecular representations are essential for property prediction and molecular design, yet large labeled datasets remain scarce.
By Boshra Ariguib, Mathias Niepert, Andrei Manolache
arXiv:2606. 03322v1 Announce Type: cross Abstract: The graphical representation of the brain offers critical insights into diagnosing and prognosing neurodegenerative disease via relationships between regions of interest (ROIs).
By Jaeyoon Sim, Minjae Lee, Guorong Wu, Won Hwa Kim
BrainNet Studio is a unified toolkit that enables the construction, analysis, and visualization of both static and dynamic brain networks. It integrates 27 algorithms—including deep learning, graph neural networks, and spatiotemporal sequence models—to support classification, biomarker identification, and the extraction of discriminative brain regions and connections. The toolkit also employs a large language model to generate researcher‑verifiable summaries of functional and structural connectivity, as well as structure‑function coupling, at individual and group levels.
By Xiwei Zeng, Shengrong Li, Yiheng Liu, Chunwei Tian, Daoqiang Zhang, Qi Zhu
arXiv:2606. 14975v1 Announce Type: cross Abstract: How the wiring and functional organization of cortex shape recurrent computation remains a central question in both neuroscience and machine learning.
By Mo Shakiba, Rana Rokni, Mohammad Mohammadi, Nima Dehghani
arXiv:2608.20380v1 Announce Type: cross
Abstract: Resting-state functional magnetic resonance imaging (rs-fMRI) has enabled non-invasive mapping of functional brain interactions for computer-aided di...
By Dengyi Zhao, Zhiheng Zhou, Zihan Wang, Guiying Yan, Xingqin Qi
Functional brain networks exhibit a hierarchical organization across ROI, community, and whole-brain levels, supporting local processing, inter-community coordination, and global integration. Recent studies have demonstrated that brain community-aware modeling is beneficial for both diagnosis and biomarker identification of brain networks.
arXiv:2606. 18287v1 Announce Type: new Abstract: Multimodal neuroimaging, integrating functional connectivity from fMRI and structural connectivity from DTI, enables non-invasive analysis of brain networks using graph neural networks.
By Siyuan Dai, Yang Du, Kun Zhao, Zhusuyi Chen, Heng Huang, Paul Thompson, Chao Shi, Haoteng Tang, Liang Zhan