arXiv:2512. 14461v2 Announce Type: replace Abstract: Sleep is essential for health, yet studying its dynamics requires manual sleep staging, a labor-intensive step in research and clinical care.
By Niklas Grieger, Jannik Raskob, Siamak Mehrkanoon, Stephan Bialonski
arXiv:2607. 07720v1 Announce Type: cross Abstract: Sleep physiology arises from the coordinated dynamics of the central nervous system (CNS) and autonomic nervous system (ANS), as reflected by multimodal polysomnography signals including EEG, EOG, EMG, ECG, and respiration.
By Zhoujie Hou, Song Wang, Kexin Lou, Mo Wang, Chen Wei, Quanying Liu
arXiv:2607. 07720v2 Announce Type: replace-cross Abstract: Sleep physiology arises from the coordinated dynamics of the central nervous system (CNS) and autonomic nervous system (ANS), as reflected by multimodal polysomnography signals including EEG, EOG, EMG, ECG, and respiration.
By Zhoujie Hou, Song Wang, Kexin Lou, Mo Wang, Chen Wei, Quanying Liu
SleepFM-2 is a foundation model trained on 282,511 polysomnography recordings, covering over two million hours of multimodal sleep physiology. It outperforms its predecessor in disease prediction, sleep scoring, and event detection, and its representation improves performance across diverse tasks—including wearable sensing, subjective sleep reports, and transfer to other EEG modalities. When combined with age, sex, and BMI, the model meets stringent discrimination criteria for 215 EHR phenotypes, adding reproducible information beyond demographics for 155 of them.
By Rahul Thapa, Christopher Sun, William Theodor Lehn-Schioler, Sophia Claire Kivelson, Umaer Hanif, Hyatt Moore IV, Harrison G. Zhang, Hafsa Ahmed, Marcus Dige, Niels R. Lorenzen, Elisabeth Roxane M. Heremans, Adrien Specht, Ulysse Gimenez, Robin Guillard, Andreas Brink-Kjaer, James Zou, Emmanuel Mignot
arXiv:2610.15351v1 Announce Type: cross
Abstract: Amyotrophic lateral sclerosis (ALS) diagnosis remains challenging due to heterogeneous symptoms and reliance on clinical assessment, underscoring the...
By Abdur Rahman, A. A. M. Muzahid, Istiak Ahmed, Dipto Biswas, Hua Han, Yujin Zhang, Ferdous Sohel
Hypnos is a multi‑modal sleep foundation model that learns generalisable representations of physiological signals by predicting the next token across eight sensing modalities (EEG, ECG, respiratory, etc.) using an auto‑regressive RQ‑Transformer. Trained on over 20,000 overnight polysomnography recordings, it outperforms existing foundation models on most benchmarks, matching strong supervised baselines for sleep‑stage classification while requiring 100× less labelled data. Additionally, Hypnos generalises beyond sleep, surpassing a dedicated ECG model in atrial fibrillation detection.
By Jonathan F. Carter, Lionel Tarassenko
arXiv:2606. 09605v1 Announce Type: new Abstract: Foundation models offer a promising route to compress multi-modal physiological signals into compact representations of human health, with broad applications across sleep medicine, cardiology, neurology and other healthcare domains.
By Jonathan F. Carter, Lionel Tarassenko
arXiv:2607. 23554v1 Announce Type: cross Abstract: In this paper, we propose the MAEConformer, a novel self-supervised learning framework that combines the Conformer architecture with the Masked Autoencoder (MAE) paradigm for large-scale representation learning from unlabelled electroencephalography (EEG) and heart rate variability (HRV) signals.
By Shuwen Yu, William P Marnane, Geraldine B. Boylan, Gordon Lightbody
Brain4FMs is a unified benchmark for evaluating brain foundation models (BFMs) on both scalp EEG and intracranial EEG (iEEG). It incorporates 17 representative models and 21 public datasets spanning clinical diagnosis, sleep staging, communication, and affective computing, and offers dataset-aware preprocessing, cross‑subject evaluation, and standardized downstream workflows. The benchmark highlights that no single BFM consistently outperforms others across all tasks, modalities, and adaptation protocols, prompting further exploratory analyses of model‑specific spatial, spectral, and discrete representations.
By Fanqi Shen, Enhong Yang, Jiahe Li, Junru Hong, Xiaoran Pan, Zhizhang Yuan, Meng Li, Yang Yang
The study compares six state‑of‑the‑art sleep‑staging foundation models on the MESA polysomnography dataset under three signal conditions: EEG only, ECG only, and EEG+ECG. Results show that EEG alone yields the highest accuracy (BIOT macro‑F1 = 0.7237), while switching to ECG alone incurs a consistent accuracy loss of about 0.35 macro‑F1 and reduces data rate to one‑third. Adding ECG to EEG offers little benefit for most models, indicating that EEG carries most of the sleep‑staging signal and that wearable‑compatible ECG alone is a viable but less accurate alternative.
By Hassan Mehdi, Riku Klen, Ayse Kosal Bulbul, Suzanne Timmons, Abdulhamit Subasi, Wei Chen, Zou Zhu, Muhammad Irfan
arXiv:2506.20354v3 Announce Type: replace-cross
Abstract: Learning from multi-variate time-series with heterogeneous channel configurations remains a fundamental challenge for deep neural networks, p...
By Francesco Carzaniga, Michael Hersche, Abu Sebastian, Kaspar Schindler, Abbas Rahimi
arXiv:2602. 07628v2 Announce Type: replace Abstract: While the shift toward unified foundation models has revolutionized many deep learning domains, sleep medicine remains largely restricted to task-specific models that focus on localized micro-structure features.
By Keondo Park, Younghoon Na, Yourim Choi, Hyunwoo Ryu, Hyun-Woo Shin, Hyung-Sin Kim