arXiv:2608. 04460v1 Announce Type: cross Abstract: The quantitative analysis of 3D neuronal morphologies requires capturing both graph topology and spatial geometry.
By Yuyang Zhang, Weihan Xu, Xuehai Zhou, Shucheng Cao, Qihuang Zhang
arXiv:2607. 18311v1 Announce Type: cross Abstract: Comparing phylogenetic tree topologies is essential for understanding epidemic dynamics, yet biologically meaningful distances such as the Subtree Prune and Regraft (SPR) distance are NP-hard to compute and intractable on large datasets.
By Renata Martins Castanheira, Miguel Bugalho, C\'atia Vaz
arXiv:2606. 11646v1 Announce Type: new Abstract: Compositional data -- vectors encoding relative proportions -- arise across scientific domains, including ecology, geochemistry, and genomics.
By Daisuke Yamada, Qijun Zhang, Travis Pence, Barbara B. Bendlin, Federico Rey, Vikas Singh
arXiv:2606. 25989v1 Announce Type: cross Abstract: Automated classification of marine species from underwater imagery is essential for scalable ocean biodiversity monitoring and conservation policy.
By Dan Zimmerman, Dimitris A. Pados, George Sklivanitis
Compositional data -- vectors encoding relative proportions -- arise across scientific domains, including ecology, geochemistry, and genomics. The features in these data often come with known hierarchical structure (e.
arXiv:2608. 15402v1 Announce Type: new Abstract: Generative model alignment has received broad interest, and significant progress has been made in supervised fine-tuning and inference-time computation.
By Steve Hanneke, Hongao Wang, Mingyue Xu
arXiv:2607. 02909v1 Announce Type: cross Abstract: Taxonomies provide key information about the semantic relationships between concepts and the inherent organization of vision and language.
By Hulingxiao He, Zhi Tan, Yuxin Peng
arXiv:2602. 01893v2 Announce Type: replace-cross Abstract: We present a geometric framework for analysing multi-head attention in large language models (LLMs).
By Timur Mudarisov, Mikhal Burtsev, Tatiana Petrova, Radu State
arXiv:2606. 07690v1 Announce Type: cross Abstract: Finetuning data selection requires balancing two competing goals: selecting examples that improve the downstream objective, and doing so without repeatedly finetuning models.
By Ning Wang, Zhengxin Zhang, Maosen Tang, Yitang Gao, Claire Cardie, Sainyam Galhotra
arXiv:2606. 24995v1 Announce Type: new Abstract: Tabular foundation models (TFMs) achieve strong performance on microbiome abundance data, yet their robustness under realistic distribution shift remains poorly characterized.
By Giulia Perciballi, Ahmad Fall, Federica Granese, Edi Prifti, Jean-Daniel Zucker
arXiv:2604. 14727v2 Announce Type: replace Abstract: To quantify the geometric capacity of transformers, we develop a tropical-geometric framework for analyzing the spatial partitions induced by conditioned self-attention.
By Ye Su, Yong Liu
arXiv:2607. 25680v1 Announce Type: cross Abstract: We propose Rashomon Alignment (RA), a new measure to assess functional similarity between two models.
By Mois\'es Santos, Peter van der Putten, Bernhard Pfahringer, Carlos Soares