arXiv AI

NeuroWeaver: An Autonomous Evolutionary Agent for Exploring the Programmatic Space of EEG Analysis Pipelines

NeuroWeaver is an autonomous evolutionary agent that designs EEG analysis pipelines by framing pipeline engineering as a discrete constrained optimization problem solved with large language model–driven code generation. It uses a Domain‑Informed Subspace Initialization to keep the search within neuroscientifically plausible solutions and a Multi‑Objective Evolutionary Optimization to balance performance, novelty, and efficiency. On five diverse benchmarks, NeuroWeaver produces lightweight pipelines that outperform state‑of‑the‑art task‑specific methods and match or exceed large foundation models while using far fewer parameters.

arXiv Computation and Language
Sep 3

NS-Copilot: An LLM-Driven Agent System for Autonomous Neuroscience Analysis

NS-Copilot is a large‑language‑model driven multi‑agent system designed to automate neuroscience data analysis. It integrates domain‑specific pre‑trained models for modalities such as EEG and extracellular spike data, and uses a natural‑language interface to orchestrate agents that plan, generate code, and synthesize results. In benchmarks on Alzheimer’s, Parkinson’s, and working‑memory spike decoding, the system consistently outperformed strong baselines across multiple trials.

By Wuche Liu, Yiran Qiao, Linlin Hou, Rui Yang, Shusen Pu, Song Wang, Jing Ma
arXiv AI
Aug 6

BrainBench: Benchmarking Large Language Models for Comprehensive EEG Understanding

arXiv:2608. 04156v1 Announce Type: new Abstract: Electroencephalography (EEG) analysis extends beyond assigning predefined labels to recordings; it requires workflows connecting natural-language instructions, signal processing, quantitative evidence, and scientific interpretation.

By Yangxuan Zhou, Sha Zhao, Yuning Chen, Chen Wu, Jiquan Wang, Shijian Li, Gang Pan
arXiv Machine Learning
Aug 17

BCIJelly: An integrated ecosystem for brain-computer interface research

arXiv:2608. 13576v1 Announce Type: cross Abstract: Brain-computer interface (BCI) research relies on multistage computational pipelines, yet progress remains constrained by fragmented data formats, heterogeneous decoder implementations and hardware-specific deployment toolchains, and researchers lack an integrated workflow.

By Liyuan Han, Xinrui Yang, Tianyu Zheng, Qizhi Yang, Yitao Qin, Liang Chen, Qinglai Wei, Binjie Hong, Xinhe Zhang, Rui Xiong, Yong Gu, Mu-ming Poo, Bo Xu, Chengyu Li, Tielin Zhang
arXiv Machine Learning
Aug 4

EEG-FM-Compass: Progress, Benchmarking, and Future Directions for EEG Foundation Models

arXiv:2601. 17883v3 Announce Type: replace Abstract: Electroencephalography (EEG) foundation models (FMs) have recently emerged as a promising paradigm for brain-computer interfaces, aiming to learn transferable neural representations from large-scale heterogeneous recordings.

By Dingkun Liu, Yuheng Chen, Zhu Chen, Zhenyao Cui, Yaozhi Wen, Jiayu An, Jingwei Luo, Dongrui Wu
Hugging Face Trending Papers
Jul 6

EEG-SpikeAgent: Agentic Closed-Loop Program Synthesis for Automated EEG Spike Detection

Automated detection of interictal epileptiform discharges in scalp electroencephalography (EEG) is clinically important, but recent high-performing deep-learning models often trade interpretability for accuracy. We introduce EEG-SpikeAgent, a closed-loop program-synthesis framework that uses a large language model (LLM) agentic system to generate signal-processing features for spike detection in scalp EEG.

arXiv AI
Sep 2

EEG-AS: Instance-Level Foundation Model Selection for EEG Foundation Models via Behavior Reconstruction

EEG-AS is an instance-level algorithm selection framework designed for EEG foundation models. It characterizes each EEG instance using latent embeddings, handcrafted neurophysiological features, and an anchor foundation model, then learns to reconstruct the behaviors of other foundation models from privileged prediction tokens. During inference, EEG-AS estimates these behaviors without running the full model portfolio, enabling efficient selection among seven EEG foundation models and significantly reducing the performance gap between the single best solver and the oracle upper bound across seven public EEG benchmarks.

By Yunzhen Zhang, Ruoxi Piao, Hasan Onur Keles, Mustafa Misir
arXiv AI
Aug 3

SeekBrain: An Autonomous Multi-Agent System for Accelerating Neuroscience Discovery

arXiv:2607. 29347v1 Announce Type: cross Abstract: Modern neuroscience relies on integrating multi-scale, multimodal datasets to uncover the neural principles underlying intelligence.

By Jiamin Wu, Peishan Xiang, Jingyang Chen, Yuqing Zhu, Yuxi Li, Ling Luo, Qihao Zheng, Jialiang Zu, Yongchao Wu, Mindong Liu, Haitao Wu, Chaofan Hu, Yijie Sun, Yuqi Hang, Yu Zhu, Shuo Li, Yue Fan, Shiyang Feng, Wanghan Xu, Tianlei Zhang, Jie Zhang, Wenlong Zhang, Bo Zhang, Kai Wang, Lei Bai, Mianxin Liu, Wanli Ouyang, Jiulin Du, Chunfeng Song