arXiv AI

Author-in-the-loop Agentic Reproducibility Auditing for a Machine Learning Conference

The paper introduces an author‑in‑the‑loop collaborative audit system for reproducibility checks during peer review, where authors explicitly declare reproduction instructions via a structured checklist. An AI agent uses these declarations to investigate and assess reproducibility, while human reviewers approve requests and decide on issue resolution. The system was deployed on 36 conference papers, identifying 20 issues that were subsequently resolved, and the study examined how different checklist conditions affected the agent’s assessment.

arXiv AI
Sep 1

CrossAudit: A Git-Native, Cross-Vendor Audit Loop for Agentic Science

CrossAudit proposes a Git‑native, cross‑vendor audit protocol for autonomous research pipelines, ensuring each work increment is reviewed by an agent from a different vendor against a human‑written rulebook. Audit outcomes, disputes, and rulings are stored as git commits, providing a replayable, versioned supervision history. The authors implemented the protocol with GitHub Actions and Python, deployed it in a computational‑chemistry pipeline, and conducted a seeded‑defect trial that revealed differing interpretations of the same rulebook by two vendors.

By Zhaohe Dong, Yuhao Chen
arXiv Computation and Language
Sep 16

PaperDoctor: Evidence-Grounded and Actionable Feedback for Scientific Papers in Progress

PaperDoctor is an agent framework that provides evidence‑grounded, actionable feedback for scientific papers before submission. It evaluates writing, layout, references, code, theory, prior work, and experiments through a three‑layer hierarchical system, linking each critique to specific evidence and revision suggestions. The system selectively rebuilds and reruns experiments to uncover reproducibility gaps, and an interactive interface lets authors explore findings tied to their manuscript.

By Kevin Qinghong Lin, Siyuan Hu, Pan Lu, Yu Chen, Yanzhe Chen, Owen Queen, Yupeng Chen, Jialin Yu, Junchi Yu, Zifeng Ding, Yuanfeng Ji, Sheng Liu, Jindong Gu, Linjie Li, Mike Zheng Shou, Philip Torr, James Zou
arXiv AI
Aug 28

Beyond Execution: Auditing Experimental Fidelity in LLM-Driven Scientific Research

The paper "Beyond Execution: Auditing Experimental Fidelity in LLM-Driven Scientific Research" argues that large language model agents must faithfully implement reference methods, design experiments that truly test claims, and provide supporting evidence. It reports that agents often hallucinate methodology—reducing datasets, substituting components, or drawing conclusions from limited resources—leading to false claims. To counter this, the authors introduce ABE‑Ralph, a reference‑anchored auditing framework that structures experimental constraints, guides implementation, and verifies results, achieving a 93% robust execution rate across 30 reproduction runs and matching or exceeding state‑of‑the‑art performance on 5 NatureBench tasks. "whyItMatters":"The study demonstrates that evaluating AI scientists requires more than code execution; it must ensure experimental design and evidence truly support the claimed scientific outcomes."

By Lezhi Yu, Xiaogang Xu, Yuhua Zhou, Shuibing He, Aimin Pan
arXiv AI
Jun 2

Make Mechanistic Interpretability Auditable: A Call to Develop Guidelines via Continuous Collaborative Reviewing

arXiv:2606. 00033v1 Announce Type: cross Abstract: While mechanistic interpretability (MI) has produced important insights into neural network internals, the field has yet to establish a standardized system to audit experiments.

By Michael Lan, Narmeen Fatimah Oozeer, Chaithanya Bandi, Philip Quirke, Austin Meek, Fazl Barez, Amirali Abdullah