arXiv AI

Automated Standardization of Legacy Biomedical Metadata Using an Ontology-Constrained LLM Agent

arXiv:2604. 08552v2 Announce Type: replace-cross Abstract: Scientific metadata are often incomplete and noncompliant with community standards, limiting dataset findability, interoperability, and reuse.

arXiv AI
Aug 11

H2: A Dual Hybrid Semantic Data Lake Architecture for Medical Data Harmonization with Human-In-the-Loop verified, LLM Driven Metadata Annotation System

arXiv:2608. 08056v1 Announce Type: new Abstract: Medical data, by its nature, exhibit a high degree of heterogeneity on multiple levels ranging from (a) different modalities like images, text and time series, (b) diverse tabular schemata introduced by institutions and (c) completely unstructured textual information data provided by healthcare professionals.

By Ioannis N. Tzortzis, Georgia Kapetadimitri, Agapi Davradou, Nefeli Kousta, Nikolaos Bakalos, Ioannis Rallis, Dimitrios Kalogeras, Nikolaos Doulamis, Anastasios Doulamis
arXiv AI
Jul 28

Retrieval-Augmented Generation of Ontologies from Relational Databases

arXiv:2506. 01232v2 Announce Type: replace-cross Abstract: Deriving OWL ontologies from relational database schemas supports semantic interoperability and downstream tasks such as knowledge graph population, ontology-based data access, graph-based learning, and automated reasoning.

By Nadeen Fathallah, Mojtaba Nayyeri, Athish A Yogi, Ratan Bahadur Thapa, Hans-Michael Tautenhahn, Anton Schnurpel, Steffen Staab