arXiv Machine Learning

Generative Nested Sampling of Atomistic Thermodynamic Landscapes

The paper introduces NS‑Flows, a flow‑based nested sampling method that replaces Markov‑chain updates with a conditional normalizing flow trained on live sets. By applying this technique to a Lennard‑Jones particle system, the authors achieve over two orders of magnitude fewer energy evaluations and a roughly one‑third reduction in wall‑clock time compared to traditional nested sampling. The study also shows that the flow’s generation efficiency varies non‑monotonically along the annealing trajectory, providing a diagnostic of the system’s internal mode complexity and identifying liquid‑like ensembles as the most challenging for current flow architectures.

arXiv Machine Learning
Sep 22

SPIBER: Reconstructing Free Energy Landscapes from Short, Unconverged Trajectories with Generative Flow Networks

arXiv:2609.22663v1 Announce Type: cross Abstract: Molecular systems have many degrees of freedom, but their metastable behavior can often be described by a few collective variables. Identifying these...

By Venkata Sai Sreyas Adury (Chemical Physics Program and Institute for Physical Science and Technology, University of Maryland), Pratyush Tiwary (Biophysics Program and Institute for Physical Science and Technology, University of Maryland, Department of Chemistry and Biochemistry and Institute for Physical Science and Technology, University of Maryland, University of Maryland Institute for Health Computing, Bethesda, USA)
arXiv AI
Oct 28

ASTROLABE: A 3D Particle-Level Surrogate for Cosmology Simulation with Physical Flow Matching

ASTROLABE is a flow‑matching generative emulator that operates directly on the 6N phase‑space coordinates of individual particles, avoiding voxel grids and allowing any observable to be measured from inference. It uses a field‑particle hybrid transformer so that compute and memory scale linearly with the number of particles, and incorporates physical flow matching by basing the prior on COLA‑derived coordinates with momentum and mass conservation enforced throughout the flow. In Lambda‑CDM tests, ASTROLABE reproduces realistic fields, accurate power spectra, halo mass functions, velocity profiles, and halo density profiles, and it generalizes to out‑of‑distribution dark‑acoustic oscillation initial conditions while also being fine‑tuned to emulate large‑scale simulations such as TNG50‑3‑dark at a fraction of the cost.

By Ibrahim Elsharkawy, David Curtin, Yonatan Kahn, Neal Weiner
arXiv AI
Jun 26

Autoregressive Boltzmann Generators

arXiv:2606. 27361v1 Announce Type: cross Abstract: Efficient sampling of molecular systems at thermodynamic equilibrium is a hallmark challenge in statistical physics.

By Danyal Rehman, Charlie B. Tan, Yoshua Bengio, Avishek Joey Bose, Alexander Tong
arXiv Machine Learning
Sep 25

Neural Transport Nested Sampling

Neural Transport Nested Sampling (NTNS) is a new sampling algorithm that merges nested sampling with neural flow-based methods to sample from Boltzmann distributions of molecular systems. It employs a flow-matching velocity as the drift in a Metropolis–Hastings corrected Langevin kernel within a nested sampling loop, requiring only target energy evaluations and enabling scalable estimation of the full partition function for high-dimensional particle systems. Benchmarks on Lennard–Jones clusters up to 55 particles show NTNS reduces interatomic distance and energy Wasserstein errors by more than an order of magnitude compared to leading neural baselines, while also providing a calibrated, temperature-resolved partition function estimate that captures phase structure from a single run.

By David Yallup, Will Handley
arXiv Machine Learning
Aug 11

Efficient identification of critical regions via Flow Matching-based Monte Carlo initialization

arXiv:2508. 15318v5 Announce Type: replace-cross Abstract: Markov chain Monte Carlo (MCMC) is a standard tool for studying many-body systems, but its practical cost can become substantial, especially when simulations must be repeated across temperatures and lattice sizes or near transition regions where equilibration becomes increasingly difficult.

By Qian-Rui Lee, Daw-Wei Wang