arXiv Machine Learning

Neural Non-Equilibrium Hamiltonian Monte Carlo for Corrected Boltzmann Sampling

arXiv:2607. 15682v1 Announce Type: new Abstract: Sampling from an unnormalized Boltzmann density requires proposals that move probability mass globally while retaining enough path-probability information for statistical correction.

arXiv Machine Learning
Sep 18

Correlation-Free Transition Path Sampling through Shooting Point Generation Guided by Committor Learning

The paper introduces GenAIMMD, an iterative algorithm that learns the committor function and trains a conditioned Boltzmann Generator to generate uncorrelated transition paths without prior knowledge of the reaction coordinate. This method combines transition path sampling with committor learning, enabling fully parallelizable sampling. Benchmarks on a toy model and a polymer system show a substantial performance improvement over standard TPS.

By Maximilian Negedly, Sebastian Falkner, Alessandro Coretti, Christoph Dellago
arXiv Machine Learning
Sep 25

Neural Transport Nested Sampling

Neural Transport Nested Sampling (NTNS) is a new sampling algorithm that merges nested sampling with neural flow-based methods to sample from Boltzmann distributions of molecular systems. It employs a flow-matching velocity as the drift in a Metropolis–Hastings corrected Langevin kernel within a nested sampling loop, requiring only target energy evaluations and enabling scalable estimation of the full partition function for high-dimensional particle systems. Benchmarks on Lennard–Jones clusters up to 55 particles show NTNS reduces interatomic distance and energy Wasserstein errors by more than an order of magnitude compared to leading neural baselines, while also providing a calibrated, temperature-resolved partition function estimate that captures phase structure from a single run.

By David Yallup, Will Handley
arXiv AI
Jun 26

Autoregressive Boltzmann Generators

arXiv:2606. 27361v1 Announce Type: cross Abstract: Efficient sampling of molecular systems at thermodynamic equilibrium is a hallmark challenge in statistical physics.

By Danyal Rehman, Charlie B. Tan, Yoshua Bengio, Avishek Joey Bose, Alexander Tong
arXiv Machine Learning
Sep 16

Training Energy-Based Models with Non-MCMC Samplers and Efficient Temperature Estimation

The paper introduces Langevin simulated bifurcation (LSB), a fast, parallel Boltzmann sampler that matches the accuracy of sequential MCMC methods. It also proposes conditional expectation matching (CEM), an efficient technique for estimating the effective temperature of samples from energy‑based models with conditional independence. Building on these, the authors develop sampler adaptive learning (SAL), which adjusts the model temperature to align with the distribution produced by LSB, enabling efficient training of semi‑restricted Boltzmann machines (SRBMs) and outperforming conventional methods on synthetic spin‑glass datasets.

By Kentaro Kubo, Hayato Goto
Hugging Face Trending Papers
Jun 25

Autoregressive Boltzmann Generators

Efficient sampling of molecular systems at thermodynamic equilibrium is a hallmark challenge in statistical physics. This challenge has driven the development of Boltzmann Generators (BGs), which allow rapid generation of uncorrelated equilibrium samples by combining a generative model with exact likelihoods and an importance sampling correction.

arXiv Machine Learning
Sep 4

Generative Nested Sampling of Atomistic Thermodynamic Landscapes

The paper introduces NS‑Flows, a flow‑based nested sampling method that replaces Markov‑chain updates with a conditional normalizing flow trained on live sets. By applying this technique to a Lennard‑Jones particle system, the authors achieve over two orders of magnitude fewer energy evaluations and a roughly one‑third reduction in wall‑clock time compared to traditional nested sampling. The study also shows that the flow’s generation efficiency varies non‑monotonically along the annealing trajectory, providing a diagnostic of the system’s internal mode complexity and identifying liquid‑like ensembles as the most challenging for current flow architectures.

By Alessandro Coretti, Nico Unglert, Sebastian Falkner, Georg K. H. Madsen, Christoph Dellago
arXiv Machine Learning
Sep 22

SPIBER: Reconstructing Free Energy Landscapes from Short, Unconverged Trajectories with Generative Flow Networks

arXiv:2609.22663v1 Announce Type: cross Abstract: Molecular systems have many degrees of freedom, but their metastable behavior can often be described by a few collective variables. Identifying these...

By Venkata Sai Sreyas Adury (Chemical Physics Program and Institute for Physical Science and Technology, University of Maryland), Pratyush Tiwary (Biophysics Program and Institute for Physical Science and Technology, University of Maryland, Department of Chemistry and Biochemistry and Institute for Physical Science and Technology, University of Maryland, University of Maryland Institute for Health Computing, Bethesda, USA)