arXiv:2606. 27361v1 Announce Type: cross Abstract: Efficient sampling of molecular systems at thermodynamic equilibrium is a hallmark challenge in statistical physics.
By Danyal Rehman, Charlie B. Tan, Yoshua Bengio, Avishek Joey Bose, Alexander Tong
arXiv:2605. 31498v2 Announce Type: replace Abstract: A long standing challenge in computational chemistry and biophysics is efficiently sampling the Boltzmann distribution of molecules.
By Daniel Pe\~naherrera, Rishal Aggarwal, David Ryan Koes
Studying the dynamical behavior of a system often depends on characterizing how it transitions between long-lived states. Because such transitions are rare, observing them usually requires specialized...
arXiv:2607. 27077v1 Announce Type: new Abstract: Energy-Based Models (EBMs) provide an interpretable framework for generative modeling of scientific data, but poor Markov Chain Monte Carlo mixing often limits their reliability.
By Nicolas B\'ereux, Aur\'elien Decelle, Cyril Furtlehner, Beatriz Seoane
The paper introduces GenAIMMD, an iterative algorithm that learns the committor function and trains a conditioned Boltzmann Generator to generate uncorrelated transition paths without prior knowledge of the reaction coordinate. This method combines transition path sampling with committor learning, enabling fully parallelizable sampling. Benchmarks on a toy model and a polymer system show a substantial performance improvement over standard TPS.
By Maximilian Negedly, Sebastian Falkner, Alessandro Coretti, Christoph Dellago
arXiv:2606. 29110v1 Announce Type: new Abstract: Recent progress in flow-based generative modeling has led to models that output high-quality samples while using only a small number of function evaluations.
By RuiKang OuYang, Hanlin Yu, Xinyue Ai, Yutong He, Nicholas M. Boffi, Pradeep Ravikumar, Jose Miguel Hernandez-Lobato, Max Simchowitz, Benjamin Kurt Miller, Omar Chehab