arXiv:2609.37642v1 Announce Type: new
Abstract: Self-supervised pretraining reshaped prediction in language and vision, and brain foundation models (BFMs) inherited its promise. Representations learn...
By Giovanni Marraffini (UNITO), Victoria Shevchenko (UNITO), Carlo Alberto Barbano (UNITO), Demian Wassermann (MIND)
The study investigates how data volume, model size, and training duration affect the performance of fMRI foundation models. Using over 200 datasets and 10,000 GPU‑hours, the authors find that larger models benefit more from additional data, and that at a fixed compute budget, increasing data yields greater gains than enlarging the model. By selecting optimal combinations of data, size, and duration, they produce models that outperform existing fMRI foundation models on out‑of‑distribution tasks while requiring less pretraining compute.
By Wenhao Ye, Xuanye Pan, Junfeng Xia, Junxiang Zhang, Mo Wang, Quanying Liu
arXiv:2609.10518v1 Announce Type: new
Abstract: fMRI foundation models increasingly aggregate heterogeneous data across brain states, cohorts, and acquisition settings, yet pretraining domains are co...
By Junfeng Xia, Wenhao Ye, Junxiang Zhang, Jiayu Zuo, Mo Wang, Quanying Liu
arXiv:2609.34167v2 Announce Type: replace
Abstract: Foundation models pre-trained on large-scale fMRI datasets have shown strong downstream performance, but at substantial data and computation cost....
By Juhyeon Park, Yeonwoo Kim, Peter Yongho Kim, Yansen Wang, Mingqing Xiao, Dongqi Han, Dongsheng Li, Taesup Moon
arXiv:2607. 16292v1 Announce Type: cross Abstract: Brain-encoding foundation models predict fMRI responses to video, audio, and text well enough to win the Algonauts 2025 challenge.
By Carson Rodrigues
Rhamba is a region‑aware pretraining framework for resting‑state fMRI that combines anatomically guided masking with hybrid Attention‑Mamba architectures. The study pretrained models on the ABIDE dataset using three masking strategies (Any, Majority, Pure) and evaluated four architectural variants, finding that the Mamba‑Attention (MA) hybrid achieved the best average AUROC on downstream schizophrenia and ADHD classification tasks. Explainable AI via Integrated Gradients highlighted that performance depends on the interaction between masking strategy and architecture rather than a single dominant configuration.
By Pankaj Pandey, Ruthwik Reddy Doodipala, Pratheek Eranki, Carolina Torres-Rojas, Manob Jyoti Saikia, Ranganatha Sitaram