arXiv:2507. 07156v2 Announce Type: replace-cross Abstract: Supervised machine learning pipelines trained on features derived from persistent homology have been experimentally observed to ignore much of the information contained in a persistence diagram.
By Nicole Abreu, Parker B. Edwards, Francis Motta
We introduce pVR, a topological machine learning framework for alignment-free genomic sequence classification that combines $p$-adic numbers with topological data analysis. Each DNA sequence is encoded along two complementary axes: a $p$-adic distance on $k$-mer prefixes, which captures hierarchical positional structure, and a compositional $L_1$ distance on $k$-mer frequencies, which captures local sequence content.
HoloAegis is a minimally parametric topological inference framework that uses frozen representations to map text onto the unit sphere and makes decisions via Gibbs‑Boltzmann free‑energy differences over pre‑computed anchor centroids. On a frozen three‑benchmark protocol, it matches WildGuard‑7B on toxicity, outperforms it on harmful behaviors, but underperforms on oversafety detection, while ShieldGemma‑2B fails on indirect harms. The study demonstrates that geometric guardrails can substitute for LLM judges in some cases and must defer to them in others, with anchor banks reducing score variance and boundary displacement.
By Tak Ho Alex Li, Kaijie Liu, Lik-Hang Lee, Kin Chung Ho, Ping Shum, Michael K. Ng
arXiv:2606. 06117v1 Announce Type: cross Abstract: We introduce pVR, a topological machine learning framework for alignment-free genomic sequence classification that combines $p$-adic numbers with topological data analysis.
By Tirtharaj Dash, Gunja Sachdeva
arXiv:2606. 11911v1 Announce Type: cross Abstract: Persistence diagrams are common representations in topological data analysis, but they do not naturally live in a vector space, and the statistical tools developed for comparing them have largely evolved separately from those used for downstream prediction.
By Juliette Murris, Bernadette Stolz, Karsten Borgwardt
arXiv:2606. 09806v1 Announce Type: cross Abstract: We introduce Topological Neural Operators (TNOs), a principled framework for operator learning on cell complexes that lifts neural operators (NOs) from functions on points and/or edges to topological domains.
By Lennart Bastian, Samuel Leventhal, Mustafa Hajij, Tolga Birdal