arXiv:2606. 08484v1 Announce Type: cross Abstract: Joint Species Distribution Modeling (JSDM) is a key enabler for biodiversity monitoring and conservation planning.
By Shufeng Kong, Tao Yu, Yuanyuan Wei, Caihua Liu, Junwen Bai, Yingheng Wang, Marc Grimson, Daniel Fink, Carla P. Gomes
The paper discusses how active learning (AL) can alleviate the expert annotation bottleneck in biodiversity monitoring by selecting the most informative samples under a fixed budget. It highlights that while AL reduces labeling effort, its non-random sample selection complicates model validation, calibration, and ecological inference, issues often overlooked in current studies. The authors review existing AL research across acoustic and image data, identify gaps such as limited species coverage and lack of real-world deployments, and propose a tutorial framework and roadmap for developing AL methods that support efficient training, reliable validation, and trustworthy ecological conclusions.
By Ben McEwen, Shiqi Zhang, Dan Stowell
arXiv:2604. 13240v2 Announce Type: replace-cross Abstract: Mapping the spatial distribution of species is essential for conservation policy and invasive species management.
By Augustin de la Brosse, Damien Garreau, Thomas Houet, Thomas Corpetti
The paper introduces ACORN, a method that blends machine‑learning predictions with occupancy models to guide ecologists in selecting which samples to review. By strategically choosing the most informative labels, ACORN achieves ecological conclusions nearly identical to fully human‑labeled data while dramatically reducing the number of expert reviews needed. The approach is evaluated on camera‑trap and bioacoustic datasets, demonstrating its effectiveness across real‑world biodiversity surveys.
By Timm Haucke, Lauren Harrell, Justin Kay, Mary Clapp, Sara Beery
arXiv:2606.20223v2 Announce Type: replace
Abstract: Camera-trap monitoring in African tropical forests increasingly extends beyond closed-canopy interiors to riverbanks, clearings, and park edges. Am...
By Hugo Magaldi, Theau d'Audiffret, Etienne Francois Akomo-Okoue, Bala Amarasekaran, Naomi Anderson, Claire Auger, Noemie Cappelle, Daniel Cornelis, Raphael Cornette, Tobias Deschner, Gabriel Dubus, Davy Fonteyn, Rosa M. Garriga, Jennifer Hatlauf, Innocent Kasekendi, Raymond Katumba, Aram Kazandjian, Alfred Ngomanda, Stephan Ntie, Simone Pika, Xavier Rufray, Harold Rugonge, John Justice Tibesigwa, Peter van Lunteren, Hadrien Vanthomme, Joeri A. Zwerts, Sabrina Krief
arXiv:2606. 32023v1 Announce Type: cross Abstract: Forest attributes are essential for national-scale resource monitoring.
By Emilie Vautier, Cl\'ement Mallet, C\'edric Vega
arXiv:2510. 09458v2 Announce Type: replace-cross Abstract: Interest in forestry automation is growing alongside rapid advances in deep learning.
By David-Alexandre Duclos, William Guimont-Martin, Gabriel Jeanson, Arthur Larochelle-Tremblay, Martine Lapointe, Th\'eo Defosse, Fr\'ed\'eric Moore, Philippe Nolet, Fran\c{c}ois Pomerleau, Philippe Gigu\`ere
arXiv:2606. 25989v1 Announce Type: cross Abstract: Automated classification of marine species from underwater imagery is essential for scalable ocean biodiversity monitoring and conservation policy.
By Dan Zimmerman, Dimitris A. Pados, George Sklivanitis
AgroBench is a reproducible benchmark that converts U.S. county-level crop yield statistics into weakly supervised pixel‑level crop time series. The data generation pipeline fuses USDA yield data with land cover masks, Sentinel‑2 and Sentinel‑1 imagery, climatic variables, and terrain information to produce multimodal sequences for individual crop pixels across the growing season. The benchmark includes over 13 million observations from 788,654 crop pixels, covering 5,107 county‑year combinations for five major U.S. crops from 2017 to 2024, and establishes a Leave‑One‑Year‑Out evaluation protocol with baseline machine learning results.
By Udaiveer Singh, Rajiv Ranjan, Shashank Tamaskar, Dharmendra Saraswat
arXiv:2608.30789v1 Announce Type: new
Abstract: Supervised deep learning methods enable the rapid processing of ecological image data, but depend on a costly annotation process. Consequently, trainin...
By Leonard Hockerts, Peter S. Stewart, Sarthak Arora, Tiffany J. Vlaar
The study demonstrates that self‑supervised learning (SSL) applied to satellite imagery can predict below‑ground ectomycorrhizal fungal richness across diverse environments, explaining over half the variance in species richness from ~12,000 field samples in Europe and Asia. SSL‑derived features outperform traditional climate, soil, and land‑cover predictors and provide a 10,000‑fold increase in spatial resolution, moving from 1 km averages to 10 m habitat‑scale observations. The approach enables temporal monitoring of underground biodiversity and was applied to two UK National Park woodlands, highlighting ancient forests with high but declining ectomycorrhizal diversity for further field verification.
By Robin Young, Michael E. Van Nuland, E. Toby Kiers, Tom\'a\v{s} V\v{e}trovsk\'y, Petr Kohout, Petr Baldrian, Srinivasan Keshav
arXiv:2606. 00548v1 Announce Type: cross Abstract: Concentrated Animal Feeding Operations (CAFOs) play an important role in agricultural production but are also associated with environmental, public health, and disease surveillance concerns.
By Oishee Bintey Hoque, Nibir Chandra Mandal, Mandy L Wilson, Samarth Swarup, Madhav Marathe, Abhijin Adiga