arXiv AI

Introduction to Graph Neural Networks for Machine Learning Engineers

arXiv:2412. 19419v2 Announce Type: replace-cross Abstract: Graph neural networks are deep neural networks designed for graphs with attributes attached to nodes or edges.

arXiv AI
Jul 28

A Survey of Graph Transformers: Architectures, Theories and Applications

arXiv:2502. 16533v3 Announce Type: replace-cross Abstract: Graph Transformers (GTs) have demonstrated a strong capability in modeling graph structures by addressing the intrinsic limitations of graph neural networks (GNNs), such as over-smoothing and over-squashing.

By Chaohao Yuan, Kangfei Zhao, Ercan Engin Kuruoglu, Liang Wang, Tingyang Xu, Wenbing Huang, Deli Zhao, Hong Cheng, Yu Rong
arXiv Machine Learning
Aug 20

GraphK: Variable-Size Graph Generation with Efficient Edge Construction

GraphK introduces an encoder‑sampler‑decoder framework that generates variable‑size graphs efficiently. It learns permutation‑invariant latent representations and samples new node embeddings via maximum likelihood, enabling both upscaling and downscaling of graph size. Edge construction uses KDTree‑based top‑k neighbor search in latent space, reducing computational cost while capturing graph properties.

By Resul Tugay, Eren Olu\u{g}, Elif Ak, Sule Gunduz Oguducu
arXiv Machine Learning
Jun 16

Graph Learning Should Move Beyond Restrictive Views of Spectral and Message-Passing GNNs

arXiv:2602. 10031v2 Announce Type: replace Abstract: Graph neural networks (GNNs) are commonly divided into message-passing neural networks (MPNNs) and spectral GNNs, reflecting two largely separate research traditions in machine learning and signal processing.

By Antonis Vasileiou, Juan Cervino, Pascal Frossard, Charilaos I. Kanatsoulis, Christopher Morris, Michael T. Schaub, Pierre Vandergheynst, Zhiyang Wang, Guy Wolf, Ron Levie
arXiv Machine Learning
Jun 2

Graph Navier Stokes Networks

arXiv:2605. 21247v3 Announce Type: replace Abstract: Graph Neural Networks (GNNs) have emerged as a cornerstone of deep learning, with most existing methods rooted in graph signal processing and diffusion equations to model message passing.

By Zexing Zhao, Guangsi Shi, Yu Gong, Tianyu Wang, Shirui Pan, Hongye Cheng, Yuxiao Li
arXiv Machine Learning
Sep 7

A Comparative Study of Counterfactual Explainers for Graph Neural Networks Enabling Multiple Types of Graph Edit

The paper presents a comparative analysis of six state‑of‑the‑art counterfactual explainers for graph neural networks, focusing on methods that can both add and remove edges to alter model predictions. It evaluates these explainers across diverse real‑world and synthetic datasets, covering binary and multi‑class graph and node classification tasks, using a range of quantitative and qualitative metrics. The study highlights the trade‑offs between explanation size, coverage, and quality, aiming to pinpoint each method’s strengths and weaknesses to inform future research.

By Maria Myrto Villia, Filippos Gouidis, Theodore Patkos, Panos Trahanias