GLIP: Graph and LLM Joint Pretraining for Graph-Level Tasks
arXiv:2606. 29773v1 Announce Type: new Abstract: Graphs are widely used to model relational systems, with applications in domains such as social networks, finance, and biomedicine.
The paper "Bridging the Divide: End-to-End Sequence-Graph Learning" introduces BRIDGE, an architecture that jointly learns from sequential and relational data by coupling a sequence model with a graph module under a single objective. It adds a token-level cross-attention layer, TOKENXATTN, to enable fine-grained message passing between events in neighboring sequences. Experiments on relationship prediction and fraud detection show that BRIDGE outperforms static graph models, temporal graph methods, and sequence-only baselines on ranking and classification metrics.
arXiv:2606. 29773v1 Announce Type: new Abstract: Graphs are widely used to model relational systems, with applications in domains such as social networks, finance, and biomedicine.
arXiv:2609.21164v1 Announce Type: new Abstract: Integrating diverse data modalities --- such as clinical notes, laboratory results, and medical imaging --- is essential for advancing clinical decisio...
arXiv:2606. 05994v1 Announce Type: new Abstract: Medical knowledge graphs (MKGs) infused with clinical knowledge have been increasingly used to model electronic health records (EHRs) to support interpretable predictions in healthcare domain.
arXiv:2601. 02366v3 Announce Type: replace-cross Abstract: Graph-based recommendation has achieved great success in recent years.
arXiv:2610.20534v1 Announce Type: new Abstract: Relational deep learning has emerged as a powerful paradigm for learning end-to-end predictive models over relational databases by representing them as...
REFINE is a framework that refines medical concept representations by creating patient‑specific temporal graphs from a global text‑attributed knowledge graph. It uses a reinforcement learning policy to allocate a personalized graph expansion budget for each observed code, then processes the resulting graph with a heterogeneous GNN and a frozen LLM that refines representations via graph‑aware soft prompts. Experiments on MIMIC‑III and MIMIC‑IV demonstrate that REFINE consistently improves various EHR prediction backbones, surpasses strong baselines, and shows robust gains across ablation studies, KG selection, and data insufficiency scenarios.
HERMES is a graph-based framework that uses only clinical text to predict patient outcomes. It builds personalized Knowledge Graphs from clinical notes via Large‑Language‑Model‑guided extraction and Contrastive Logic Modeling, capturing temporal dynamics and treatment changes. A Graph Attention Network then synthesizes patient representations, and experiments on MIMIC‑III and MIMIC‑IV show HERMES outperforms text‑only baselines for in‑hospital mortality and 30‑day readmission prediction.
arXiv:2608. 04193v1 Announce Type: cross Abstract: Language models (LMs) offer strong textual representations for electronic health records (EHRs), but they encode patient sequences in isolation and provide limited explainability.
Bridge-LP is a new framework for link prediction on text‑attributed graphs that combines Graph Neural Networks and Language Models. It introduces three design components: jumping connections for robust language model training, compressed embeddings to encode neighborhood information, and a cache embedding strategy to reduce computational cost. Experiments on nine datasets show that Bridge‑LP outperforms 40 existing models, achieving up to a 43.06% improvement in Mean Reciprocal Rank.
arXiv:2608. 10969v1 Announce Type: new Abstract: Healthcare data, such as Intensive Care Unit (ICU) records, comprise heterogeneous multivariate time series sampled at irregular intervals with pervasive missingness.
arXiv:2606. 31166v1 Announce Type: cross Abstract: Text-attributed graphs (TAGs), where each node carries a natural language description, require models to jointly reason over text and graph topology.
arXiv:2608. 13023v1 Announce Type: new Abstract: Relational Deep Learning (RDL) models multi-tabular databases as temporal heterogeneous graphs to enable end-to-end representation learning.