arXiv Machine Learning

Learning Hybrid Biophysical Neuron Models with Neural ODEs

arXiv:2606. 16693v1 Announce Type: cross Abstract: Biophysical neuron models link measurements of neural activity to underlying cellular mechanisms.

arXiv Machine Learning
Aug 5

A Physics-Flavored Transformer Network for Parametrizing Contraction Dynamics of Engineered Skeletal Muscle Tissues

arXiv:2608. 03927v1 Announce Type: new Abstract: Engineered Skeletal Muscle Tissues (ESMs) have become a key structure for biomedical disease modeling and pharmacological screening, yet their functional characterization often relies on simplistic metrics like peak force, discarding critical kinetic information.

By Mattias Luber, Timo Betz
arXiv Machine Learning
Jul 17

RTS Smoother-Guided Learning of Physics-Based Neural Differential Models

arXiv:2607. 15180v1 Announce Type: new Abstract: Ordinary differential equations (ODEs) are widely used to model dynamical systems in physics, biology, neuroscience, and physiology, but in many applications some equations of the dynamics are unknown and only a subset of the state variables are measured.

By Ahmet Demirkaya, Georgios Stratis, Tales Imbiriba, Zachary D. Danziger, Deniz Erdogmus
arXiv AI
Jul 15

BattVAE-GP: Generative Modeling of Long-Horizon Battery Degradation with Uncertainty Quantification

arXiv:2607. 11943v1 Announce Type: cross Abstract: Long-horizon physics-based simulations of battery degradation provide mechanistic insight but remain computationally expensive, limiting their use for dense exploration of operating conditions over extended cycle life.

By Raghvender Raghvender, Mahdi Abid, Ferran Brosa Planella, Charles Delacourt, Arnaud Demorti\`ere
arXiv AI
Jun 2

Rare Events, Real Signals: Functional Ensembles as Units of Computation in Deep Spiking Networks

arXiv:2606. 00073v1 Announce Type: cross Abstract: We investigate how internal representations emerge across hierarchical processing systems by introducing a neuroscience-inspired framework for analyzing deep spiking neural networks (SNN) through the lens of functional connectivity.

By Aditi Aravind, Konstantinos Ladakis, Mario Alexios Savaglio, Stelios M. Smirnakis, Maria Papadopouli
arXiv AI
Jul 20

Learning the Brain's Dynamics as a Port-Hamiltonian System: A GNN-Surrogate Metriplectic Twin for Non-Equilibrium Cortical Dynamics and Closed-Loop Neuromodulation

arXiv:2607. 10439v2 Announce Type: replace-cross Abstract: We model human motor cortex, recorded during rest and motor-imagery BCI conditions, as a port-Hamiltonian system: a conservative interconnection (skew-symmetric coupling between band-limited neural phasors) together with a dissipative port whose state-dependent decay is set by a graph-neural-network surrogate.

By Dibakar Sigdel
arXiv AI
Jul 28

CAPT: A Multi-task Continuous Autoregressive Transformer enabling Cross-dataset and Cross-species Transfer for Calcium Population Dynamics

arXiv:2607. 23258v1 Announce Type: new Abstract: Large-scale calcium imaging has created an opportunity to build foundation-style models for neural population dynamics, but a central question remains unresolved: \textbf{whether a model pretrained on one collection of recordings can generalize to new datasets, experimental paradigms, and even species.

By Xinhong Xu, Yimeng Zhang, Yuanlong Zhang