arXiv AI

ReportMedSAM: Guiding Segmentation Through Radiology Reports

arXiv:2607. 14116v1 Announce Type: cross Abstract: Free-form radiology reports contain rich clinical descriptions, yet converting them for reliable segmentation remains challenging due to the inherent variability of natural language.

arXiv AI
Sep 10

Semantic Context-aware mOdality fUsion Transformer (SCOUT): A Context-Aware Multimodal Transformer for Concept-Grounded Pathology Report Generation

SCOUT is a concept‑grounded multimodal transformer that generates whole‑slide pathology reports by integrating local histological patterns, whole‑slide context, and expert‑curated diagnostic concepts. It uses evolving visual representations and recursively updated slide‑ and concept‑conditioned representations, with separate attention pathways during decoding that are fused adaptively for each token. Evaluated on TCGA‑BRCA, HistAI, and REG‑2025, SCOUT outperformed existing methods, improving BLEU, METEOR, and ROUGE‑L scores and raising the Clinical Report Quality Score on REG‑2025.

By Suryakant Singh, Saarthak Kapse, Joel Saltz, Prateek Prasanna
arXiv Computer Vision
Sep 15

Designing UNICORN: a Unified Benchmark for Imaging in Computational Pathology, Radiology, and Natural Language

arXiv:2603.02790v2 Announce Type: replace Abstract: Foundation models are changing the way we develop medical artificial intelligence. By learning broadly generalizable features across diverse data m...

By Michelle Stegeman (and on behalf of the UNICORN consortium), Lena Philipp (and on behalf of the UNICORN consortium), Fennie van der Graaf (and on behalf of the UNICORN consortium), Marina D'Amato (and on behalf of the UNICORN consortium), Cl\'ement Grisi (and on behalf of the UNICORN consortium), Luc Builtjes (and on behalf of the UNICORN consortium), Joeran S. Bosma (and on behalf of the UNICORN consortium), Judith Lefkes (and on behalf of the UNICORN consortium), Rianne A. Weber (and on behalf of the UNICORN consortium), James A. Meakin (and on behalf of the UNICORN consortium), Thomas Koopman (and on behalf of the UNICORN consortium), Anne Mickan (and on behalf of the UNICORN consortium), Mathias Prokop (and on behalf of the UNICORN consortium), Ewoud J. Smit (and on behalf of the UNICORN consortium), Fr\'ed\'erique Meeuwsen (and on behalf of the UNICORN consortium), Geert Litjens (and on behalf of the UNICORN consortium), Jeroen van der Laak (and on behalf of the UNICORN consortium), Bram van Ginneken (and on behalf of the UNICORN consortium), Maarten de Rooij (and on behalf of the UNICORN consortium), Henkjan Huisman (and on behalf of the UNICORN consortium), Colin Jacobs (and on behalf of the UNICORN consortium), Francesco Ciompi (and on behalf of the UNICORN consortium), Alessa Hering (and on behalf of the UNICORN consortium)
arXiv Computer Vision
Sep 10

Synergistic Vision-Language Reinforcement Enables Scalable On-Demand Analysis across Diverse Clinical Tasks

arXiv:2505.03380v2 Announce Type: replace Abstract: Accurate delineation of tumors and surrounding organs-at-risk is essential for radiotherapy, surgery and treatment response assessment, yet remains...

By Haonan Wang, Jiaji Mao, Lehan Wang, Qixiang Zhang, Marawan Elbatel, Yi Qin, Huijun Hu, Baoxun Li, Wenhui Deng, Weifeng Qin, Hongrui Li, Jialin Liang, Jun Shen, Xiaomeng Li
arXiv AI
Sep 15

MedSAM3: Delving into Segment Anything with Medical Concepts

MedSAM-3 is a text‑promptable medical segmentation model that builds on the Segment Anything Model (SAM) by fine‑tuning it with medical images and semantic concept labels. It enables precise anatomical segmentation through open‑vocabulary text descriptions, moving beyond purely geometric prompts. The accompanying MedSAM-3 Agent incorporates multimodal large language models to perform complex reasoning and iterative refinement, and experiments across X‑ray, MRI, ultrasound, CT, and video modalities show it outperforms existing specialist and foundation models.

By Anglin Liu, Xu R. Cao, Yifan Shen, Yi Lu, Xiang Li, Qianqian Chen, Jintai Chen
arXiv AI
Jul 28

Explaining BiomedCLIP with Weighted Banzhaf Interactions Supported by Tree-Gram Parsing

arXiv:2607. 23368v1 Announce Type: cross Abstract: Vision-Language Models (VLMs) are demonstrating significant capabilities in medical tasks like radiology analysis, yet providing faithful and interpretable explanations remains a key consideration for their responsible deployment in clinical settings.

By Jakub Rymarski (University of Warsaw, Poland), Adam Rempa{\l}a (University of Warsaw, Poland), Bart{\l}omiej Sobieski (University of Warsaw, Poland), Przemys{\l}aw Biecek (University of Warsaw, Poland)
arXiv Computer Vision
Sep 3

AlphaRAD: Grounded Zero-Shot Classification in Chest Radiology via $\alpha$-Corrected Binary Cross Entropy and Factorized Latent Supervision

AlphaRAD introduces a grounded zero‑shot classification framework for chest radiology that leverages structured medical concepts extracted from reports and a novel α‑Corrected Binary Cross‑Entropy loss to reduce in‑batch noise. It also presents FLaS, a lightweight cross‑modal fusion module that factorizes VLPM representations into independent subspaces, improving spatial grounding without adding parameters. The method achieves state‑of‑the‑art performance on 16 classification benchmarks and sets new records on several grounding, phrase‑grounding, and segmentation datasets.

By Jianzhong You, Yuan Gao, Chris McIntosh
Hugging Face Trending Papers
Jun 24

Disease-Centric Vision-Language Pretraining with Hybrid Visual Encoding for 3D Computed Tomography

Vision-language pre-training (VLP) holds great promise for general-purpose medical AI by leveraging radiology reports as rich textual supervision, yet existing methods struggle with 3D CT imaging due to inefficient visual backbones and coarse semantic alignment. To address these issues, we propose a tailored VLP framework featuring three key components: (1) a CNN-ViT hybrid encoder that replaces ViT's patch embedding with a 3D CNN backbone to efficiently capture local anatomical details while preserving global attention and compatibility with pre-trained cross-modal priors; (2) a disease-level contrastive learning mechanism using learnable query tokens to dynamically extract disease-specific semantics from full reports and align them with corresponding visual features, thereby disentangling distinct diseases within the same anatomical region; and (3) a diagnosis-aware prompt strategy that employs real clinical phrases and aggregated disease prototypes to bridge the pre-training-inference gap and enhance zero-shot diagnostic reliability.

arXiv Machine Learning
Aug 5

MedCRP-CL: Continual Medical Image Segmentation via Bayesian Nonparametric Semantic Modality Discovery

arXiv:2605. 20297v2 Announce Type: replace-cross Abstract: Medical image segmentation faces a fundamental challenge in continual learning: data arrives sequentially from heterogeneous sources, yet effective continual learning requires discovering which tasks share sufficient structure to benefit from joint learning.

By Ziyuan Gao
arXiv Computer Vision
Sep 16

BiCLIP: Bidirectional and Consistent Language-Image Processing for Robust Medical Image Segmentation

BiCLIP is a bidirectional multimodal framework that enhances medical image segmentation by allowing visual features to iteratively refine textual representations, improving semantic alignment. It incorporates an augmentation consistency objective to stabilize learning against perturbed inputs. Experiments on QaTa-COV19 and MosMedData+ show that BiCLIP outperforms state‑of‑the‑art image‑only and multimodal baselines, achieving strong performance even with only 1% labeled data and resisting common clinical artifacts such as motion blur and low‑dose CT noise.

By Saivan Talaei, Fatemeh Daneshfar, Abdulhady Abas Abdullah, Mourad Oussalah