OgBench: A Framework for Evaluating Graph Neural Networks on Omics Data
arXiv:2605. 15511v2 Announce Type: replace Abstract: Graph Neural Networks (GNNs) have become the dominant framework for inductive graph-level learning.
arXiv:2603. 06952v2 Announce Type: replace Abstract: As graphs scale to billions of nodes and edges, graph Machine Learning workloads are constrained by the cost of multi-hop traversals over exponentially growing neighborhoods.
arXiv:2605. 15511v2 Announce Type: replace Abstract: Graph Neural Networks (GNNs) have become the dominant framework for inductive graph-level learning.
arXiv:2608. 02128v1 Announce Type: new Abstract: Training Graph Neural Networks on large graphs is challenged by the memory cost of storing all node representations across layers.
arXiv:2602. 01553v3 Announce Type: replace-cross Abstract: Link prediction is a core challenge in graph machine learning, demanding models that capture rich and complex topological dependencies.
arXiv:2607. 17272v1 Announce Type: new Abstract: Node representation learning has advanced rapidly, yet most existing methods rely on per-dataset training and hyperparameter tuning.
arXiv:2607. 26404v1 Announce Type: new Abstract: Graph Neural Networks (GNN) facilitate effective prediction on graph data such as molecules, media networks and neural network blueprints.
arXiv:2602. 09258v2 Announce Type: replace Abstract: Deployed graph neural networks (GNNs) are frozen at deployment yet must fit clean data, generalize under distribution shifts, and remain stable to perturbations.
Training Graph Neural Networks on large graphs is challenged by the memory cost of storing all node representations across layers. We show that several existing scalable approaches can be written as structured modifications of the GNN propagation matrix, providing a unified perspective that exposes their respective limitations.
arXiv:2608. 06441v1 Announce Type: new Abstract: Full-graph GNN training delivers high accuracy but scales poorly on multi-server clusters due to heavy, irregular inter-node embedding exchanges.
arXiv:2607. 17374v1 Announce Type: cross Abstract: Graph Neural Network (GNN) inference on billion-scale graphs is challenging due to the large memory footprint of features and embeddings and high disk I/O costs in out-of-core settings.
arXiv:2607. 05017v1 Announce Type: cross Abstract: The performance of deep learning models crucially depends on the settings of hyperparameters like learning rate, initialization scale, and weight decay.
arXiv:2607. 21885v1 Announce Type: new Abstract: Coarsening-based training for graph neural networks (GNNs), i.
arXiv:2606. 11562v1 Announce Type: new Abstract: Graph analysis underlies many applications whose answers cannot be looked up in a single record or retrieved along a path: laundering rings, drug repurposing, user preference, and scientific theme are all inferred from a node together with its neighbourhood.