arXiv Machine Learning By Chinmay Mirji, Prashant Shekhar, Foram Madiyar, Hao Peng

Role-Aware Morgan Fingerprints for Reaction Yield Prediction

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The paper introduces MFP, a reaction yield prediction method that uses role-aware Morgan fingerprints. It computes count-based circular fingerprints for each reaction component, aggregates them by chemical role, and combines them with transformation-sensitive difference features into a fixed-length descriptor for a feed-forward neural regressor. On the Suzuki‑Miyaura and Buchwald‑Hartwig benchmarks, MFP achieves R² scores of 0.878 and 0.969 respectively, while training an order of magnitude faster than graph or Transformer-based alternatives.

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