arXiv:2608. 04460v1 Announce Type: cross Abstract: The quantitative analysis of 3D neuronal morphologies requires capturing both graph topology and spatial geometry.
By Yuyang Zhang, Weihan Xu, Xuehai Zhou, Shucheng Cao, Qihuang Zhang
arXiv:2607. 18311v1 Announce Type: cross Abstract: Comparing phylogenetic tree topologies is essential for understanding epidemic dynamics, yet biologically meaningful distances such as the Subtree Prune and Regraft (SPR) distance are NP-hard to compute and intractable on large datasets.
By Renata Martins Castanheira, Miguel Bugalho, C\'atia Vaz
arXiv:2310.08774v3 Announce Type: replace-cross
Abstract: Phylogenetics is a branch of computational biology that studies the evolutionary relationships among biological entities. Its long history an...
By Mingyang Zhou, Zichao Yan, Elliot Layne, Esmeralda S. Whitammer, Dinghuai Zhang, Moksh Jain, Mathieu Blanchette, Yoshua Bengio
arXiv:2606. 11646v1 Announce Type: new Abstract: Compositional data -- vectors encoding relative proportions -- arise across scientific domains, including ecology, geochemistry, and genomics.
By Daisuke Yamada, Qijun Zhang, Travis Pence, Barbara B. Bendlin, Federico Rey, Vikas Singh
arXiv:2606. 25989v1 Announce Type: cross Abstract: Automated classification of marine species from underwater imagery is essential for scalable ocean biodiversity monitoring and conservation policy.
By Dan Zimmerman, Dimitris A. Pados, George Sklivanitis
Compositional data -- vectors encoding relative proportions -- arise across scientific domains, including ecology, geochemistry, and genomics. The features in these data often come with known hierarchical structure (e.