arXiv Machine Learning By Oktay Agcaoglu

Group ICA 2.0: Closing the Gap Between Subjects and Group Latent Decomposition with Copula-Linked Group ICA (CoLiG-ICA)

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arXiv:2608. 16029v1 Announce Type: new Abstract: Group Independent Component Analysis (gICA) is widely used to decompose high-dimensional functional MRI data into interpretable brain networks.

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arXiv Machine Learning
Aug 27

MSR-IVA: Masked Structural Residual Independent Vector Analysis for State-Aware Fusion of Structural MRI and Dynamic Functional Network Connectivity

The paper introduces MSR-IVA, a state-aware fusion method that combines a shared structural representation with state‑specific residual adaptations and masks for incomplete state expression. Applied to an Alzheimer’s Disease Neuroimaging Initiative cohort, MSR-IVA increased matched source coupling by 6.5% and decreased unmatched dependence by 15.7% compared to a baseline IVA approach. For subjects expressing both states, the method achieved a mean absolute cross‑state structural source correlation of 0.9177, far higher than the 0.2978 obtained without sharing, indicating effective preservation of source correspondence while allowing state‑specific adaptation.

By Victor Solomon, Zening Fu, Rafal Angryk, Vince D. Calhoun, Jingyu Liu
arXiv AI
Sep 21

Rhamba: Region-Aware Hybrid Attention-Mamba Framework for Self-Supervised Learning in Resting-State fMRI

Rhamba is a region‑aware pretraining framework for resting‑state fMRI that combines anatomically guided masking with hybrid Attention‑Mamba architectures. The study pretrained models on the ABIDE dataset using three masking strategies (Any, Majority, Pure) and evaluated four architectural variants, finding that the Mamba‑Attention (MA) hybrid achieved the best average AUROC on downstream schizophrenia and ADHD classification tasks. Explainable AI via Integrated Gradients highlighted that performance depends on the interaction between masking strategy and architecture rather than a single dominant configuration.

By Pankaj Pandey, Ruthwik Reddy Doodipala, Pratheek Eranki, Carolina Torres-Rojas, Manob Jyoti Saikia, Ranganatha Sitaram
arXiv AI
Jun 12

BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learning

arXiv:2604. 27277v3 Announce Type: replace-cross Abstract: Brain MRI underpins a wide range of neuroscientific and clinical applications, yet most learning-based methods remain task-specific and require substantial labeled data.

By Yizhou Wu, Shansong Wang, Yuheng Li, Mojtaba Safari, Mingzhe Hu, Chih-Wei Chang, Harini Veeraraghavan, Xiaofeng Yang