arXiv AI By Ziqiao Meng, Rongsheng Chen, Zhi Zheng, Nikita Kazeev, Zhenkun Wang, Andrey Ustyuzhanin, Wee Sun Lee

CrystalAR: Autoregressive Modeling for Symmetric Crystal Generation

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arXiv Machine Learning
Sep 23

Deep Generative Crystal Structure Prediction: A Benchmark Study and a Controlled Test of Prototype Dependence

The study benchmarks 12 deep generative crystal structure prediction models against the template-based TCSP 2.0 on 180 test structures, finding that template retrieval achieves the highest top‑1 success (68.3%). Most generative predictions overlap with template substitutions, and removing entire stoichiometric prototype families from training reduces accuracy by 50‑78%, indicating strong prototype dependence. Only a small subset of predictions remain after such removal, suggesting limited genuine de‑novo capability.

By Lai Wei, Rongzhi Dong, Ying Feng, Madeline Miklos, Jianjun Hu
arXiv Machine Learning
Oct 2

Riemannian Flow Models with Reinforcement Learning for Molecular Crystal Structure Prediction

The paper introduces CG-OMatG, an equivariant Riemannian flow-based generative model that predicts molecular crystal structures using a coarse-grained, hierarchical representation. It treats molecules as rigid bodies, performs inter- and intra-molecular message passing, and learns to reconstruct molecule centroids, orientations, and lattice parameters conditioned on chemical species and conformer geometry. The model is trained on OMC25 and CSD datasets, fine-tuned with policy gradient reinforcement learning to favor low-energy structures, and validated against a CSP blind test benchmark using COMPACK packing-similarity analysis.

By Thomas Egg, Harry Winston Sullivan, Maya M. Martirossyan, Philipp H\"ollmer, Cheng Zeng, Adrian Roitberg, Mingjie Liu, Richard Hennig, Sapna Sarupria, Ellad B. Tadmor, Stefano Martiniani
arXiv Machine Learning
3d ago

SymADiT: Symmetry-Aware Crystal Generation with Latent Flow Matching

SymADiT is a symmetry‑aware variant of the All‑atom Diffusion Transformer (ADiT) designed for crystal generation. It uses Wyckoff‑based crystal representations and enforces symmetry constraints from the crystal’s space group and atom positions during latent‑space generative modeling. The approach yields stable, symmetric, and physically plausible crystals while maintaining competitive performance against both symmetry‑aware and symmetry‑agnostic models.

By Anmar Karmush, Cedric Mathieu Brandenburg, Soheil Ershadrad, Johanna Rosen, Michael Felsberg, Filip Ekstr\"om Kelvinius