The paper introduces an agentic-AI framework that autonomously operates an atomic force microscope (AFM) by integrating a large language model with instrument functions via the Model Context Protocol. Three MCP-based agents—AFM Messenger, AFM Pilot, and AFM Doctor—translate natural‑language instructions into commands, assess and adjust image quality, and diagnose artifacts with transparent post‑processing, respectively. Benchmarking shows that the guarded execution layer eliminates wrong‑command execution, and live experiments demonstrate that the AI matches expert operators in image quality and efficiency.
By Zahra Ayar, Marcos Penedo, Mahdi Mehdikhani, Nahid Hosseini, Prabhu Prasad Swain, Georg E. Fantner
The paper argues that evaluating agents as fixed models is insufficient, proposing instead to treat them as configurable systems. Using a new benchmark of four scientific tasks, the authors analyze how five configuration aspects—task information, reasoning, self‑verification, time budget, and backbone model—affect performance, noting that about 54% of outcome variance arises from run‑to‑run differences even with the same settings. The study finds that providing more task information has the strongest impact, while interactions among settings (e.g., extra time only helps with adequate information or model capability) and the choice of verification tools significantly shape agent behavior.
By Luis Wiedmann, Leander Girrbach, Cordelia Schmid, Zeynep Akata
arXiv:2606.14397v4 Announce Type: replace
Abstract: As agentic systems continue to evolve and are widely deployed in real-world scenarios, there is a growing demand to faithfully evaluate their capab...
By Mykola Vysotskyi, Runqi Lin, Grzegorz Biziel, Michal Zakrzewski, Sebastian Montagna, Damian Rynczak, Shreyansh Padarha, Kumail Alhamoud, Zihao Fu, William Lugoloobi, Kai Rawal, Hanna Yershova, Taras Rumezhak, Guohao Li, Fazl Barez, Baoyuan Wu, Arkadiusz Drohomirecki, Yarin Gal, Chris Russell, Christopher Summerfield, Adam Mahdi, Volodymyr Karpiv, Philip Torr, Adel Bibi
arXiv:2606. 01961v1 Announce Type: new Abstract: Autonomous agents are increasingly expected to support end-to-end medical-AI research workflows, moving beyond isolated prediction tasks or short-form clinical question answering.
By Junqi Liu, Salena Song, Yuhan Wang, Jiawei Mao, Hardy Chen, Xiaoke Huang, Tianhao Qi, Pengfei Guo, Yucheng Tang, Yufan He, Can Zhao, Andriy Myronenko, Dong Yang, Daguang Xu, Yuyin Zhou
arXiv:2609.23512v1 Announce Type: new
Abstract: Large language model agents are typically deployed with predefined configurations, although the required model capability, context, tools, permissions,...
By Md. Ashraful Babu
arXiv:2606. 14397v1 Announce Type: new Abstract: As agentic systems continue to evolve and are widely deployed in real-world scenarios, there is a growing demand to faithfully evaluate their capabilities.
By Mykola Vysotskyi, Runqi Lin, Grzegorz Biziel, Michal Zakrzewski, Sebastian Montagna, Damian Rynczak, Shreyansh Padarha, Kumail Alhamoud, Zihao Fu, William Lugoloobi, Kai Rawal, Hanna Yershova, Xander Davies, Taras Rumezhak, Guohao Li, Fazl Barez, Baoyuan Wu, Arkadiusz Drohomirecki, Yarin Gal, Chris Russell, Christopher Summerfield, Adam Mahdi, Volodymyr Karpiv, Philip Torr, Adel Bibi