HyGRAIL is a framework for discovering scientific hypotheses in incomplete knowledge graphs by combining a graph neural network (GNN) triage with large language model (LLM) review. The GNN scores candidate hypotheses and routes only ambiguous cases to the LLM, which receives structured evidence from the graph converted into natural language. Experiments on MatKG show HyGRAIL achieves the highest F1 score, improves over baselines, and cuts LLM calls by over 54%.
Scientific knowledge graphs organize entities and relations extracted from scientific literature, but they remain inherently incomplete. Missing typed links in such graphs can therefore represent plau...
arXiv:2606. 09105v1 Announce Type: new Abstract: Generating novel, feasible, and high-quality research ideas is an important yet challenging task in scientific discovery.
arXiv:2604. 12503v2 Announce Type: replace-cross Abstract: Large Language Models (LLMs) have shown remarkable capabilities across various tasks but remain prone to hallucinations in knowledge-intensive scenarios.
arXiv:2608. 03292v1 Announce Type: new Abstract: Long Document Visual Question Answering (LongDocVQA) requires Multimodal Large Language Models (MLLMs) to locate, integrate, and reason over heterogeneous document elements distributed across multiple pages.
arXiv:2511. 03217v2 Announce Type: replace-cross Abstract: Large language models (LLMs) excel in generating fluent utterances but can lack reliable grounding in verified information.
arXiv:2606. 29773v1 Announce Type: new Abstract: Graphs are widely used to model relational systems, with applications in domains such as social networks, finance, and biomedicine.
EvidenceNet is a disease‑specific dataset that transforms full‑text biomedical literature into structured evidence records and graph representations, preserving study design, provenance, and quantitative support. Using an LLM‑assisted pipeline, it extracts experimentally grounded findings, normalizes entities, scores evidence quality, and links related records via typed semantic relations. The released subsets—EvidenceNet‑HCC and EvidenceNet‑CRC—contain thousands of evidence records and richly connected graphs, with high extraction and relation‑type accuracy, enabling retrieval‑augmented question answering and graph‑based tasks such as link prediction and target prioritization.
arXiv:2607. 17917v1 Announce Type: new Abstract: Scientific Reasoning Graph Extraction (SRGE) aims to recover explicit links among observations, evidence, intermediate claims, and paper-level conclusions.
arXiv:2609.39786v1 Announce Type: new Abstract: Large language models (LLMs) are increasingly combined with knowledge graphs (KGs) to ground reasoning in structured evidence. However, most LLM-based...
OptimusKG is a multimodal biomedical labeled property graph that integrates structured and semi‑structured resources to preserve detailed, type‑specific metadata across molecular, anatomical, clinical, and environmental domains. The graph contains nearly 191,000 nodes, over 21.8 million edges, and more than 67 million property instances derived from 18 ontologies, with a top‑level schema that enforces node and edge constraints while retaining granular provenance. Validation using the PaperQA3 agent found that 70.0% of sampled edges are supported by literature evidence, and the graph offers a standardized resource for machine learning, knowledge‑grounded retrieval, and hypothesis generation in biomedical research.
arXiv:2606. 11562v1 Announce Type: new Abstract: Graph analysis underlies many applications whose answers cannot be looked up in a single record or retrieved along a path: laundering rings, drug repurposing, user preference, and scientific theme are all inferred from a node together with its neighbourhood.
arXiv:2605. 16902v2 Announce Type: replace Abstract: Scientific artifacts such as models and datasets are foundations for research.