OgBench: A Framework for Evaluating Graph Neural Networks on Omics Data
arXiv:2605. 15511v2 Announce Type: replace Abstract: Graph Neural Networks (GNNs) have become the dominant framework for inductive graph-level learning.
arXiv:2606. 11562v1 Announce Type: new Abstract: Graph analysis underlies many applications whose answers cannot be looked up in a single record or retrieved along a path: laundering rings, drug repurposing, user preference, and scientific theme are all inferred from a node together with its neighbourhood.
arXiv:2605. 15511v2 Announce Type: replace Abstract: Graph Neural Networks (GNNs) have become the dominant framework for inductive graph-level learning.
arXiv:2606. 00328v1 Announce Type: new Abstract: Large language models (LLMs) are increasingly used for knowledge base question answering (KBQA), where answering requires selecting entities from a question-specific knowledge-graph subgraph.
arXiv:2607. 17272v1 Announce Type: new Abstract: Node representation learning has advanced rapidly, yet most existing methods rely on per-dataset training and hyperparameter tuning.
arXiv:2608. 12391v1 Announce Type: cross Abstract: Graph reasoning provides a promising testbed for evaluating the reasoning ability of large language models (LLMs), as graph instances can be programmatically generated, structurally controlled, and naturally scaled to long-input settings.
arXiv:2606. 29773v1 Announce Type: new Abstract: Graphs are widely used to model relational systems, with applications in domains such as social networks, finance, and biomedicine.
arXiv:2602. 11641v2 Announce Type: replace Abstract: Text-attributed graphs (TAGs) associate nodes with textual attributes and graph structure, enabling GNNs to jointly model semantic and structural information.
arXiv:2607. 20477v1 Announce Type: new Abstract: {\em Text-Attributed Graphs} (TAGs) have emerged as an expressive data model for integrating graph topology with rich textual semantics.
arXiv:2602. 11745v2 Announce Type: replace Abstract: Graph models are fundamental to data analysis in domains rich with complex relationships.
arXiv:2603. 06952v2 Announce Type: replace Abstract: As graphs scale to billions of nodes and edges, graph Machine Learning workloads are constrained by the cost of multi-hop traversals over exponentially growing neighborhoods.
arXiv:2605. 21510v2 Announce Type: replace-cross Abstract: Reference-based graph compression encodes each vertex's neighbor list as differences from a nearby encoded list.
arXiv:2608. 00542v1 Announce Type: new Abstract: Graphs model relational data throughout science and industry, from citation networks to product co-purchase graphs.
arXiv:2510. 04567v3 Announce Type: replace-cross Abstract: Graph Neural Networks (GNNs) are powerful tools for processing relational data but often struggle to generalize to unseen graphs, giving rise to the development of Graph Foundational Models (GFMs).