arXiv AI

HiPoly: a hierarchical polymer-native AI framework for property prediction and generative design

HiPoly is a polymer-native AI framework that uses a three-level hierarchical graph architecture built on the G2RINS representation to process complete polymer descriptions. It encodes stochastic inter-monomer connectivity, composition, and molecular weight directly within its architecture, enabling end-to-end workflows from experimental data to property prediction, generative design, and physics-based validation. The framework achieves state-of-the-art accuracy for thermophysical properties of multi-component polymer systems and demonstrates generative design by discovering sustainable, PFAS-free alternatives with target surface-energy properties.

arXiv AI
Aug 18

Empowering Polymeric Materials Discovery by Artificial Intelligence

arXiv:2606. 20753v2 Announce Type: replace-cross Abstract: Polymeric materials underpin modern technologies spanning energy storage, microelectronics, healthcare and sustainable manufacturing.

By Chenyao Ma, Linda Zhang, Yuheng Chen, Wei Du, Shangwen Fang, Zihao Jiang, Chuanyu Liu, Xinyu Ma, Rui Su, Gang Wang, Muyao Yu, Dong Zhong, Jie Zhu, Weibo Gong, Huan Gu, Limin Li, Chen Shen, Rui Wu, Zhenghao Wu, Kan Xu, Min Zhou, Donglin He, Xiayun Huang, Shan Jiang, Pengfei Ou, Jiayu Peng, Yuwei Zhang, Jie Zhao, Di Zhang, Piao Ma, Zhenghao Li, Hao Li
arXiv Machine Learning
3d ago

Molecular representation shapes the balance between target fidelity and exploration in flow based polymer generation

The paper introduces PolyLatentFlow, a continuous‑time flow‑matching framework for polymer generation, and LlamaUni, a multimodal representation that fuses polymer sequences with 3D structural data. In unconditional generation, the combination yields the highest number of valid, novel candidates while preserving diversity, and in conditional settings it systematically shifts property distributions across a 200 °C target range. Across multi‑property tasks, the representation choice affects validity, training‑set replay, and structural proximity, with PolyLatentFlow + LlamaUni achieving the best balance of high validity, low replay, and high target hit yield.

By Tianren Zhang
arXiv Statistics ML
Sep 7

Towards AI-Driven Nanomedicine Discovery: A Benchmark and Multimodal Learning Framework for Nano Self-Assembly Prediction

The paper introduces NSA-Bench, a public benchmark for predicting nano self‑assembly (NSA) between molecular pairs, framing it as a binary classification problem. It presents NSA‑Net, a multimodal learning framework that fuses graph topology, sequence semantics, and physicochemical descriptors to predict self‑assembly, achieving high ROC‑AUC scores and outperforming existing baselines. The study also demonstrates how NSA‑Net’s predictions can guide experimental formulation refinement through an NSA‑Agent case study.

By Quan Hao, Mengyue Fan, Zifan Dong, Jianduo Zhao, Changhao Xiao, Shangqing Jiao, Hao Zhang, Yudong Wang, Fei Xia, Jigang Wang, Liguo Zhang, Chong Qiu
arXiv AI
4d ago

El Agente Potente: High-Throughput Agentic Atomistic Simulations

El Agente Potente is an agentic system that integrates typed execution graphs and a coding mode to facilitate machine‑learning interatomic potential (MLIP) driven atomistic simulations. Typed execution graphs offer structured, provenance‑aware workflows where large language models handle planning and routing while deterministic Python code performs scientific computation and validation. The coding agent builds customized workflows for tasks needing procedural flexibility, invoking existing Potente functions for supported calculations. The system is demonstrated across materials discovery, energy‑landscape exploration, adsorption, and catalytic reaction workflows, with benchmarks on reproducibility and LLM token cost.

By Tsz Wai Ko, Jiaru Bai, Thomas Swanick, Yeonghun Kang, Changhyeok Choi, Angelina Qihong Jiang, Aiwei Yin, Varinia Bernales, Al\'an Aspuru-Guzik
arXiv Machine Learning
Jul 23

Boltzmann-Expected Molecular Design with Decoupled Annealing Flows

arXiv:2607. 19519v1 Announce Type: cross Abstract: Most 3D properties relevant to molecular design, including free energies and shape descriptors, are $\textit{expectations}$ over the Boltzmann distribution over 3D configurations of a molecular graph.

By Selma Moqvist, Richard Beckmann, Ross Irwin, Roc\'io Mercado, Simon Olsson