arXiv AI

SimMOF: AI agent for Automated MOF Simulations

arXiv:2603. 29152v2 Announce Type: replace Abstract: Metal-organic frameworks (MOFs) offer a vast design space, and as such, computational simulations play a critical role in predicting their structural and physicochemical properties.

arXiv AI
Aug 14

Foam-Agent: A Large Language Model-Based Multi-Agent Framework for Automating Computational Fluid Dynamics Workflows

arXiv:2505. 04997v3 Announce Type: replace Abstract: Computational fluid dynamics (CFD) has been the main workhorse of computational physics, yet its steep learning curve and fragmented, multi-stage workflow create significant barriers to entry.

By Ling Yue, Nithin Somasekharan, Tingwen Zhang, Yadi Cao, Zhangze Chen, Shimin Di, Shaowu Pan
arXiv AI
Aug 26

LLM Agents Perform Controlled Experiments Using Simulation Models

The paper introduces a multi‑agent framework that lets large language models (LLMs) perform controlled experiments using scientific simulation models, specifically for pharmaceutical process design. Given a user query and baseline configuration, the system builds a structured task, designs and runs comparative simulations, interprets outcomes, and generates evidence‑based recommendations for optimizing process parameters. By integrating high‑fidelity simulations with LLMs, the approach yields more specific, actionable outputs and improves user‑rated correctness and helpfulness compared to language‑only reasoning.

By Yuchen Xia, Michael Weyrich, Nasser Jazdi, Johannes St\"umpfle, Johannes Sigel, Akshay Narla, Gavin K. Reynolds, Anna Jawor-Baczynska, Pol Llopart
arXiv AI
Sep 15

El Agente Potente: High-Throughput Agentic Atomistic Simulations

El Agente Potente is an agentic system that integrates typed execution graphs and a coding mode to facilitate machine‑learning interatomic potential (MLIP) driven atomistic simulations. Typed execution graphs offer structured, provenance‑aware workflows where large language models handle planning and routing while deterministic Python code performs scientific computation and validation. The coding agent builds customized workflows for tasks needing procedural flexibility, invoking existing Potente functions for supported calculations. The system is demonstrated across materials discovery, energy‑landscape exploration, adsorption, and catalytic reaction workflows, with benchmarks on reproducibility and LLM token cost.

By Tsz Wai Ko, Jiaru Bai, Thomas Swanick, Yeonghun Kang, Changhyeok Choi, Angelina Qihong Jiang, Aiwei Yin, Varinia Bernales, Al\'an Aspuru-Guzik
Hugging Face Trending Papers
Aug 5

CheMLFlow: An Open-Source Platform for Cheminformatics and Materials Informatics Applications

CheMLFlow is an open-source platform for building and executing end-to-end, high-throughput, and agentic workflows for scientific and technological applications. CheMLFlow targets a common bottleneck in scientific machine learning development, where researchers often need to assemble data acquisition, curation, representation, model training, validation, screening, interpretation, and reporting into a reproducible pipeline, even when their primary research contribution concerns only one stage.

arXiv AI
Aug 11

El Agente Gr\'afico: A Semantic Execution Runtime for Scientific Agents

arXiv:2602. 17902v2 Announce Type: replace Abstract: Large language models (LLMs) can plan scientific workflows and generate code, but these capabilities do not specify how scientific state is validated, transferred and recorded across heterogeneous computational and experimental operations.

By Jiaru Bai, Abdulrahman Aldossary, Thomas Swanick, Marcel M\"uller, Yeonghun Kang, Changhyeok Choi, Naruki Yoshikawa, Zijian Zhang, Jin Won Lee, Tsz Wai Ko, Aiwei Yin, Mohammad Ghazi Vakili, Chris Crebolder, Varinia Bernales, Al\'an Aspuru-Guzik